Gene Sala_0298 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0298 
Symbol 
ID4082861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp296539 
End bp297327 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content70% 
IMG OID638008656 
Productenoyl-CoA hydratase/isomerase 
Protein accessionYP_615354 
Protein GI103485793 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.342394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC TGCTGATCGA GGCGCGCGGT GCGGTCGAGA TCGCGACGCT GAACCGGCCC 
GAACGGCTGA ATGCGCTGAA CGAGGAGCTG GTCGACGAAC TCAACGCCTA TTTCGGCGGG
CTCGTGGAGC GGCCCGACGT GCGCGTCGTG ATCCTGCGCG GCGCGGGGCG CGGTTTCTGC
GCGGGACTCG ATATTCAGGA GGACCGGGCG GGCGACGAGA CGCCGGTGCT TCGCACGCTG
CGCACGCAGA CGCGCATCGG CAACATCTAT CGCAAGATGC GCGCCTGTCC GCAGCCGGTC
ATCGCGCTGG GCCATGGCGC CGCGTGCGGG GGCGGCCTGT CGCTGCTGCT CGCGTCGGAC
GTGCGCTATG CCACGCCGTC GCTGCGCTGC AATGCCGCCT ATATCCGCAT CGGGCTGGGC
GGGTGCGACA TGGCGTCGAG CTATTTCCTG CCGCGGCTGG TCGGCGCGAG CCTCGCCGCC
GAGATGATCC TGACCGGGCG CTTTATCGAC GCCGAGCGCG CGCTGCGCGC CGGGCTGGTG
AGCGAGATCG TCGGGGAGGA GGCGTTGCTC GACCGCGGAC TGGCGCTCGC CGACGAGATG
CTGGCGACGA GTCCGCACGG GCTGCGCCTG TCGAAGCAGG CGCTGAACCT CAACCTCGAC
GCGCCGAGTC TGGACGCCGC GATGGCGATC GAGGACCGGC AGCAGGTGAT TCTGTCGGCG
ACCGAGGATC ACAAGGAGGC GCTGGCCGCT TTTCTGGAGA AGCGCGCGCC CGAATATCGC
GAGCGATAG
 
Protein sequence
MSALLIEARG AVEIATLNRP ERLNALNEEL VDELNAYFGG LVERPDVRVV ILRGAGRGFC 
AGLDIQEDRA GDETPVLRTL RTQTRIGNIY RKMRACPQPV IALGHGAACG GGLSLLLASD
VRYATPSLRC NAAYIRIGLG GCDMASSYFL PRLVGASLAA EMILTGRFID AERALRAGLV
SEIVGEEALL DRGLALADEM LATSPHGLRL SKQALNLNLD APSLDAAMAI EDRQQVILSA
TEDHKEALAA FLEKRAPEYR ER