| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0294 |
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| Symbol | |
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| ID | 4082654 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 292085 |
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| End bp | 294085 |
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| Gene Length | 2001 bp |
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| Protein Length | 666 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008652 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_615350 |
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| Protein GI | 103485789 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.254174 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCAA CATTCAGTCC GGGGCAGCTC AAGTTCCTGA AGGCGCTGAC CGAGGCCTTG
TTCGACGGCG CGGCGATGGC GATCACGCCC GATCAGGTCG TCGCCAATAT CGCCGAGCTG
TTCGGCAAGG TCGGCGGCAC CAAATTGGAC GAGATGCGCG TCTCGCTCAT CGCCACCGAA
ATCGCGCTCG GACCGCTGTT CGCCGAGGTC GATGTCGCGG CGCGCGTCGA GCGGATCGCC
GACCGGCTGC GCGACAGCCG CATCGACCTG TTCCAGGACA TGGGGCGGCT GCGCGGCATC
GTCTATGCCT GCTATTACGG CCACTGGCTG CCGGGCGATC AGGACGCCAA CGTCGCCAAC
CCGGTCCACC GCCAGATCGG TTTCGCGCTC CCCCGGTTCC GCGCGCGCGG GCCGGGCGAC
GTCCCCATCA CGCCCGTGCA GGGCCGCGAG ATCGACCCCG CGCATATATT GACCGCCGAT
AGTCTCGACG ATGAATATGA CGTGATTGTC GTCGGTTCGG GCGCGGGCGG CGCGGTCGCG
GGCTATAATA TCGCGGCGCA GGGCTATCGG GTGCTGATCG TCGAGGCGGG GCCCTTCTAC
CCCAGCCACG CGATCACCCA CCACGAACTC GACATGATCG CGAATCTTTA CAAGCATGGC
GCGGTGCAGA CGACGACCAA CCGCGATTTC GTCGTTTTCC AGGGGCGGTG CGTCGGCGGA
TCGTCGACGA TCAACAACGG CATCTGCCTG CGCGTCAACG AGCCCGGCCG CACCCACCCC
GACGCAGAGG ATGTGCTCGC CAAATGGGCG ACCATCGGCG CGCCGATCGA CCCCGCGGCC
TTTCACGCCA GCTATGACGC GGTGCAGGCG ATGCTCGGCA TCGCGCGCAT CGAATCCCGC
AGCGGACGGC ACAACGGCCC GCACCTCATC AATGGCTGGC GCGCCTATGC CAACGCCTCG
TCCGATCCCA AAGACAAGCG CGCGATCGCC GACTGGTTCG ACAAGAATTT CGGCCCGCCG
AACACCCCGA ATGCCTGCGC CTATTGCGGC TATTGCAATT CGGGCTGCGC CTATGGCCGC
CGCATGGGCG TCGCGCAGAC CTATCTGCCC CAGGCGTGCC GCGATCATGG CGCGCGCATC
CTGCCGCGCA CCAAGGTCCA GCAGATCCTC TGGCAGACCG CGATCGACGG GCGACGCGAG
GCCGAGGCGG TCAGGCTCGT CCTGCCCGAC GGAGCGAACC GCCTCGTCCG CGCGCGCGTC
GGCGTCGTTG TCGCCGCGGG CACGATCGCC TCGTCGAAAC TGCTGGCACG CAGCGACATT
GACGGCACGG GTTATCAGGT GTCGCTGAAC GTCGCCTCGC CCGTCGTCGC GCTGATGCCG
CCGGGCGTCG GCGGCGATGC GTGGGACGAG GACCAGATGT CGAGCTATGT CGATTGCGGC
GACTTTCTGC TCGAAAGCCA TTTCCAGCCG CCGATGTCGA TGGCCTCGCT GATGCCCGGC
TGGTTCGCCG ATCACGCCGA CCGCATGAAG AATTACGGTC GCGTCCATTC GGCGGGCATT
CTTTTTCCCG CCGACCGGCG TGGGCAGATC GTCGACGGCA AGCTCCGGTT CCGGCTCGAT
TCAACCGACG ACCTGCCGCT GCTCCGCCGC GCGATGGCGA CGCTGACCAA GGTGCATTTC
GCCGCCGGGG CGATCGAATG CTATCCCGCG CTGGCGAAAG GACAGACGGT GACGCCGGAT
ATGGACATCG ACGCCTTTTT CGAGGCGGCG ATTCGCGAAC AGGACGATGT AACTCTGTCG
AGCAGCCACC CGCACGGCGG CAATGCGATG AACGAGGATT CGCAGCACGG CGTCGTCGAC
CTGGATTGCC GCGTCCACGG CACCACAAAT GTGCTCGTCA CCGACGCCAG CGTCTTTCCC
AGCTGCATCC GCGTCAACGC CCAATGGACC ACGATGGCAA TGGCGCATTA TGCGACGGCG
CGCGGCGATC CCTTCCGGTG A
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| Protein sequence | MTATFSPGQL KFLKALTEAL FDGAAMAITP DQVVANIAEL FGKVGGTKLD EMRVSLIATE
IALGPLFAEV DVAARVERIA DRLRDSRIDL FQDMGRLRGI VYACYYGHWL PGDQDANVAN
PVHRQIGFAL PRFRARGPGD VPITPVQGRE IDPAHILTAD SLDDEYDVIV VGSGAGGAVA
GYNIAAQGYR VLIVEAGPFY PSHAITHHEL DMIANLYKHG AVQTTTNRDF VVFQGRCVGG
SSTINNGICL RVNEPGRTHP DAEDVLAKWA TIGAPIDPAA FHASYDAVQA MLGIARIESR
SGRHNGPHLI NGWRAYANAS SDPKDKRAIA DWFDKNFGPP NTPNACAYCG YCNSGCAYGR
RMGVAQTYLP QACRDHGARI LPRTKVQQIL WQTAIDGRRE AEAVRLVLPD GANRLVRARV
GVVVAAGTIA SSKLLARSDI DGTGYQVSLN VASPVVALMP PGVGGDAWDE DQMSSYVDCG
DFLLESHFQP PMSMASLMPG WFADHADRMK NYGRVHSAGI LFPADRRGQI VDGKLRFRLD
STDDLPLLRR AMATLTKVHF AAGAIECYPA LAKGQTVTPD MDIDAFFEAA IREQDDVTLS
SSHPHGGNAM NEDSQHGVVD LDCRVHGTTN VLVTDASVFP SCIRVNAQWT TMAMAHYATA
RGDPFR
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