| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0288 |
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| Symbol | |
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| ID | 4082648 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 285198 |
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| End bp | 286742 |
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| Gene Length | 1545 bp |
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| Protein Length | 514 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008646 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_615344 |
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| Protein GI | 103485783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.328365 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.664954 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGAGC GGCCCCCTGG GGAAATGAAC GATGCGGCGC GGGCCACATC GGCGACGCGC
GGGGGACGGG ATTTGCCGCT GACCAGGGAC GGACGGACGG AGCGCGAACG GCGACGCGTT
GAAACGCTGC GCGAATATCA TCTGCTCGAT ACCGGTGCCG AAGCGGCATT CGATCGCGTG
ACCAAGCTGG TCGCCGACCT GTTCGACGCG CCGATCGCGC TCATTTCGCT CGTCGATGAC
TGCCGCCAAT GGTTCAAGTC GGCGCACGGG CTCGACGTTC CGGAAACGCC GCGCGACATC
AGCTTTTGCA AACATGTCGT CGAGGACGAA CAGCCGCTCA TTGTCGGCGA TGCCGCCAGC
GACCCGCGTT TTCAGGACAA CCCGCTCGTC ACGGGCGAGC CGTACATCCG CTTTTATGGC
GGCGTGCCGC TCTTCGCCTA TAATGGCGCG ATCCTCGGGA CGCTCTGCAT CATCGACCGC
AAGCCGCGCC CGGCGCTCAG CTTTCGCGAG GTCGAGCGGC TTCAGGATTT CGCCGCGCTG
GTGATGGCGG AGGCCGATCT GCGCCGGATC GTCGGCGAGC GCGACGAGGC GCGGCGAATG
CTGGAGCAGG CGCTCGATTT TTCGGGCATC GCGACCTGGC GCTACGACGC GCGCACCGGC
GCGATCCACT GGAGCGGTGC GGTGGCCGAG CTGTGGGGCG CCGATTATGC GACCGCGCTG
GCGCATATCG ACGGCTTTTT CGACCGCCTC CACCCCGACG ACCGCGAGGC CGTGCGCGGC
GTGCTGGGCG AATCGGTCGC GCATGGCGGG CATTATGCGA CCGAATATCG CATCCAGCAT
CCCGAACGCG GCGTCCGCTG GATCGCGGTT CACGCCGACT GGGACGTCAG GACCGACGAC
GCGATCCTGA CCGGGGTCAG CATGGACATC ACCGAACAGA AAAGCCGCCA GGAAAATGCC
AATCTGCTGA TGCGCGAGCT GCATCACCGG ATGCGCAACC TGTTCGCGAC GGTCGGCGCG
ATCATCTCGC TCACCCGCCA CGCCGCGCGC GACGTCGACG ATTATGTCGA ACGGATCAGC
AGCCGCCTCG ACGCGCTGAA CCGCGCCCAG AATGTCCTGC TCGGCGCCAA TTTCATGACC
GGGTCGATGC ACGCCCTCCT GCGCGAGGTG GAGGCGAGCT TTCCGCGCAT TCACTGGTCG
GGGCCCGATC TGTTGCTTCC CGAAAATGCG CTGGTGGCGA TGGCGCTGCT GTTCAACGAG
CTGGCGACCA ATGCCGCCAA GCACGGCGCG CTGTCGGGTG AACGCGGGCA GGTCGAGGTC
CGCTGGACGC AGGACGACGA AGGCGCCGAC GATCGCCGCT TTCGCCTGAC CTGGGCCGAA
AGCGGCGCCG ACCGCGAAAT CACGCCGCCC GAACGAACGA GCTTTGGCAC CTTGCTCATG
GAGCGCAGCG TCAGGAACAA CCTTGGCGGA ACGATCGCGC GGCGCTGGGA GCCGGGTGGC
CTGATCGTCG ACATCACGCT CCCCGCACGG TGGCGCGAGG CCTGA
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| Protein sequence | MAERPPGEMN DAARATSATR GGRDLPLTRD GRTERERRRV ETLREYHLLD TGAEAAFDRV
TKLVADLFDA PIALISLVDD CRQWFKSAHG LDVPETPRDI SFCKHVVEDE QPLIVGDAAS
DPRFQDNPLV TGEPYIRFYG GVPLFAYNGA ILGTLCIIDR KPRPALSFRE VERLQDFAAL
VMAEADLRRI VGERDEARRM LEQALDFSGI ATWRYDARTG AIHWSGAVAE LWGADYATAL
AHIDGFFDRL HPDDREAVRG VLGESVAHGG HYATEYRIQH PERGVRWIAV HADWDVRTDD
AILTGVSMDI TEQKSRQENA NLLMRELHHR MRNLFATVGA IISLTRHAAR DVDDYVERIS
SRLDALNRAQ NVLLGANFMT GSMHALLREV EASFPRIHWS GPDLLLPENA LVAMALLFNE
LATNAAKHGA LSGERGQVEV RWTQDDEGAD DRRFRLTWAE SGADREITPP ERTSFGTLLM
ERSVRNNLGG TIARRWEPGG LIVDITLPAR WREA
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