| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0284 |
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| Symbol | |
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| ID | 4082644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 282062 |
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| End bp | 282697 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008642 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_615340 |
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| Protein GI | 103485779 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.725237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.366803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGCCC CCACCGCCGC TGCCTCGCAG CCGCAGGCCG ACGCGCTCTC GGACAGCGAA
TTCAAGGCTT TGCTTGCCGG GGTCATTCCC CATCTGCGCG CCTATGGCCG CAGCCTGTCG
GGAAACCCCG ACCTCGCCGA CGATCTGACG CAGGACACGA TGGTCAAGGC CTGGGCGTCG
CGCGACCGGT TCGAGCGCGG AACGTCGATC AAGGCGTGGA CCTTCGTGAT CCTGCGCAAC
ACCTTTCTGT CGCAGATGCG CCGCAACAAG TTCGTCGGCG AATATGACGA AACCGCGGTC
GAGCGCACCA TATCGACCCC CGCAAGCCAG GAAGAGAGCG GCGAGATGGC CGACGTGCAA
CGCGGCCTGA TGGAATTGCC ACAGGATCAG CGCGAGGCGC TGATCCTCGT CGGCGCGGGC
GGCATGTCGT ACGAGGAGGC TGCGAGCATC TGTGATTGCG CGCTCGGCAC GATGAAAAGC
CGCGTGTCAC GCGCCCGCGC CGCGCTCGAG GAGATCATGG CGCGTGGCCG GTTCAGCCAG
AAGCGCGCCG ACGCGCCCCC GGCGAGCGAA GCCGTCGATG CCATCATGGA CAGCGTCGAG
GAAATCGCCG CGCGGCGCGA GGCGGCGAAC CGTTGA
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| Protein sequence | MTAPTAAASQ PQADALSDSE FKALLAGVIP HLRAYGRSLS GNPDLADDLT QDTMVKAWAS
RDRFERGTSI KAWTFVILRN TFLSQMRRNK FVGEYDETAV ERTISTPASQ EESGEMADVQ
RGLMELPQDQ REALILVGAG GMSYEEAASI CDCALGTMKS RVSRARAALE EIMARGRFSQ
KRADAPPASE AVDAIMDSVE EIAARREAAN R
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