| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0283 |
|---|
| Symbol | |
|---|
| ID | 4082643 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 280774 |
|---|
| End bp | 281907 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638008641 |
|---|
| Product | glucose sorbosone dehydrogenase |
|---|
| Protein accession | YP_615339 |
|---|
| Protein GI | 103485778 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.377294 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCCGCCT GTTCGGCGCC CGCGGCCACC GAAGCCGCCC CCGCCGACAC CGCCGCGCTC
GACGCGTCCG GGGAACATCC CGCCGTCCCG CTCGCCGACG CACCTTTCAG GGTGCAGGAG
ATCGCGAGCT TCGACGAGCC CTGGGCGATG ACCTTCCTTC CCGGCACACG CGCCGCGCTC
GTCACGGAAA AGGCCGGCAA GCTCAAACTG TGGCAAGAGA GTGGCCCGAC GCTCGACGTC
ACGGGCGTTC CCGCGGTCGC CTATGGCGGC CAGGGCGGCC TCGGCGACGT CATCGTCGCG
CCCGATTTCG CGACCAGTGG CACGATTTAC CTGAGCTGGG CGGAGGCGGG CAGCGGGGGC
ACCTTCGGCG CCGTCGTCGG CCGCGCCAAG CTGGTCCAGG GCGCCGCGCC GCGCCTTGAG
GGGCTGGAGG TCATCTGGAA ACAGACGCCC AAGGTGACAG GCCGCGGTCA TTATTCGCAC
CGCCTCGCCT TCTCTCCCGA CGGCAGATAT CTTTTCATCG GCTCGGGCGA ACGCCAGAAG
TTCGACCCGG CGCAGGACAT GACGGGCAAT CTCGGGAAGA TCGTCCGCCT GAACCCCGAC
GGCAGCATTC CCGCCGACAA CCCCTTTGCC GGTGAAGGCG GCGTCACCGC GCAAATCTGG
TCGCTCGGCC ACCGTAACAT CCTGGGCCTC GCCTTCGACG ATTCCGGGCG GCTGTGGAAC
CAGGAAATGG GCCCGCGCCA CGGCGACGAG GTCAATCTGG TCGAGGCAAA GGCCAATTAC
GGCTATCCGA TCGTGTCGAA CGGCGACCAT TATGACGGCC GCGACATCCC CGACCACCCG
ACGCGCCCGG AGTTTGCGGC GCCAAAGCTG TGGTGGAACC CCGCCGTGTC CCCCGCCGGC
CTCGCCTATT ATGGCGGCGA CCTTTATCCC GGCTGGAAGA ACAGCCTGTT GATGGGCGCG
CTGTCGGGCG AGGGGCTGGT GCAGATGCGG ATCGACGGCA CGGCGCTGCA CAAGGCGGGG
CGCTGGGACT TCGGCACGCG CATCCGCGAG GTCGAGGTGC GCGAGGACGG CACCGTCTGG
CTGCTCACCG ACGGCGACGA CGGCAGGCTG GTGAAGCTGG TTCCGAAACG ATAA
|
|---|
| Protein sequence | MAACSAPAAT EAAPADTAAL DASGEHPAVP LADAPFRVQE IASFDEPWAM TFLPGTRAAL
VTEKAGKLKL WQESGPTLDV TGVPAVAYGG QGGLGDVIVA PDFATSGTIY LSWAEAGSGG
TFGAVVGRAK LVQGAAPRLE GLEVIWKQTP KVTGRGHYSH RLAFSPDGRY LFIGSGERQK
FDPAQDMTGN LGKIVRLNPD GSIPADNPFA GEGGVTAQIW SLGHRNILGL AFDDSGRLWN
QEMGPRHGDE VNLVEAKANY GYPIVSNGDH YDGRDIPDHP TRPEFAAPKL WWNPAVSPAG
LAYYGGDLYP GWKNSLLMGA LSGEGLVQMR IDGTALHKAG RWDFGTRIRE VEVREDGTVW
LLTDGDDGRL VKLVPKR
|
|---|
| |