| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0279 |
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| Symbol | |
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| ID | 4082639 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 276172 |
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| End bp | 277917 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638008637 |
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| Product | tetratricopeptide TPR_4 |
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| Protein accession | YP_615335 |
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| Protein GI | 103485774 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.262775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAGG CGAAAACGAA CGAAATGGAC CCCGACGAGG TCGACCGGAT CATCGCCGAT
GAGCTTCAGC GCCTGCTCGA ATCGCCCATG TTCACGCGCT CGCCGGTGTT GTCGCGGTTG
CTGCAATTCC TTGTCGAACA CCGGCTGCGC GGCGGGCGCA GCGCGCCCAA GGCCTATGCG
ATCGCGACCG AGGCGCTGGG GCGGAGCGAG GATTTCGACC CCGCGGTCGA CAGCTATCCG
CGCGTGATGG TCGGCCGGCT GCGGACGCTG CTCGACCGCT ATTATTCCGA AACCGCGTGG
GTCCACCGGC TGCGCGTGCC GCAGGGCAGC TACGAGGTGG TCGTCCAGCA TCGCTCGTCA
CCTCCCGCCG CGCGCGCGGC CGAGGGACCG GACGGCGACG ATGACGTCAA GGCCGCAGCC
GCAGCGGCTG GCGGCGATGC GGTGCCGCCG GCGGTCGCCA GGCCGGGCGG CGGCCGGTTC
GGCCGGTGGA TCGTCGCCCT GCTGCTTCTG GCGCTCGCGT TGCTCGCGCT CTGGGCGCTG
CGCGGCGAAG CGCCGCGCCT GCTCGCGCGC GATGCCGTTC CCGAACCCTT GCTCGAGATC
AGCGCCCCGG ATTCAGGCAA TCTGCCTGAA TCGCGCGCGC TCGCGCGCGC GCTCGACGGC
AGACTGCGCG ACGGGCTGCG GCGCTTTGAC CTGATCGAAC TGCTCGCCGC GCACACGGCG
GGCGGCGCAG CTCCACGCCC TGCCGACTAC CGGCTCGACA CCTCGCTCGT CCGCACGGTC
GACGGGGTCG TCGACGTGAC GCTGGTGCTC AACCGCGTCG CCGACCAGCG CGCGATCTGG
TCGCAGCAAT TGCGGCTGGA CCATTTCGAC ACGCCGGAGT TCACCGCTGT CGAGCCCGTC
ATCGCGCAGC TTGCGGGCGA TTATGGCGTG ATCGTGCGCG ACCAGATCCG GCGCCAGCCC
GATAATTATG CGCCGGGCTA TCCCTGCCTC GCGCAGTTCA ACCGGTTGCG CCAGATGCGC
GACGCGGCCA CGGCCAAGCG GGTCGTCAGC TGTCTGCGCG CGATGATCAA GGCCGACCCG
CGCGATCCGG TCGCGCTTGC CGCGCTGTCG CTCGTGCGGT TCGGCGACTG GCAGCCGCAG
CGCGGGACGC CCGCAGGCCG CGAAGCCTTT GCCGAGGCGC GCGCGCTGGC GCTGCGTGCC
TATCGCGAAG ATCCCGATTC CTCGGTCGGG CAGTTCGCGA TGGCGCGCGC GAACTTTTAC
GCGGGCGACT GTGCGGCGGG CATTGCGATG GGCGACAGCG CGCGAGCGCT CAACCCCTAT
GATGCCGACA TGGCCGGCTT CCTCGGTCTG TTCAAGCTGG CGTGCGACCA TGCGGATGAG
GGCGAGGAAC TGCTGCGCCG TTCGCTGGCG CTCGACCCTT CCAATCCCGG CGTGCCTGCG
GTGACGCTGG CTTTCATCCT GTCGCAGCGC GGCGAACAGG CGCAGGCGCA GGCGATCCTC
GATCGAATGC CGTCGCCGAC CAACCTCGAG CCGCAATATC TGATGGTGCG GTCGGTCGTG
CTGGCGCGAC AGGGCGAGGT CGACGCGGCG CGCGCATTGT GGCGCCGCCT GCTCGCCTAT
ACGCGCCAGC CCGCCGATGC GCCGCCCGAA CAGGTGCTCG GCCGTTTCCT GATCACTCCG
GCGGTGATCG CGCGTGCGTC GGCGGCGCTG CGCGAATCCG GCGTCGTCGG CCCTCCGGCG
GGCTGA
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| Protein sequence | MDQAKTNEMD PDEVDRIIAD ELQRLLESPM FTRSPVLSRL LQFLVEHRLR GGRSAPKAYA
IATEALGRSE DFDPAVDSYP RVMVGRLRTL LDRYYSETAW VHRLRVPQGS YEVVVQHRSS
PPAARAAEGP DGDDDVKAAA AAAGGDAVPP AVARPGGGRF GRWIVALLLL ALALLALWAL
RGEAPRLLAR DAVPEPLLEI SAPDSGNLPE SRALARALDG RLRDGLRRFD LIELLAAHTA
GGAAPRPADY RLDTSLVRTV DGVVDVTLVL NRVADQRAIW SQQLRLDHFD TPEFTAVEPV
IAQLAGDYGV IVRDQIRRQP DNYAPGYPCL AQFNRLRQMR DAATAKRVVS CLRAMIKADP
RDPVALAALS LVRFGDWQPQ RGTPAGREAF AEARALALRA YREDPDSSVG QFAMARANFY
AGDCAAGIAM GDSARALNPY DADMAGFLGL FKLACDHADE GEELLRRSLA LDPSNPGVPA
VTLAFILSQR GEQAQAQAIL DRMPSPTNLE PQYLMVRSVV LARQGEVDAA RALWRRLLAY
TRQPADAPPE QVLGRFLITP AVIARASAAL RESGVVGPPA G
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