| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0275 |
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| Symbol | |
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| ID | 4081223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 272384 |
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| End bp | 274570 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008633 |
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| Product | excinuclease ABC subunit B |
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| Protein accession | YP_615331 |
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| Protein GI | 103485770 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0556] Helicase subunit of the DNA excision repair complex |
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| TIGRFAM ID | [TIGR00631] excinuclease ABC, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.249968 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCC AGATTCGCAC CTCGCTCGAC GAAATCGACA CCGCCGAAGG CTATGTGCCG
CACCGCCCCG CCCGGCCCGA CAAGGTCGAA GGCGGCAAGC GATTCGAACT GGTTAGCGAC
TATGAACCTG CGGGCGATCA GCCGACAGCG ATCAGGGAAC TGGTCGAAAC CGCGCGCACG
GGCGAACGCG ACCAGGTGCT GCTCGGTGTC ACCGGATCGG GCAAGACCTT CACCATGGCC
AAGGTGATCG AGGAGTTGCA GCGCCCCGCG CTGATCCTCG CGCCCAACAA GATCCTTGCT
GCGCAGCTCT ATGGCGAGTT CAAGAGCTTC TTTCCGAACA ATGCCGTCGA GTATTTCGTC
AGCTATTACG ACTATTACCA GCCCGAAGCC TATGTGCCGC GTTCGGACAC CTATATCGAG
AAGGAGTCGA GCGTAAACGA GGCGATCGAC CGGATGCGCC ATTCGGCGAC GCGCGCGCTG
CTCGAACGCG ACGATGTCAT CATCGTCGCC TCGGTGAGCT GCCTCTATGG CATCGGGTCG
GTCGAAACCT ACTCCGCGAT GATCTTCGAC CTCAAGAAAG GCCAGGTCGC CGACAACCGT
GAGATCATCC GCAAGCTCGT CGCGCTCCAG TACAAACGCA ACGATCAGGC CTTCGCGCGC
GGCAATTTCC GCGTGCGCGG CGACAGCCTC GAAATCTTCC CGTCGCACTA TGAGGATATG
GCGTGGCGCG TCAGCTTTTT CGGCGACGAG ATCGAGGAGA TCACCGAGTT CGACCCGCTG
ACCGGCAAGA AGATCGCGAG CCTGAACAGC ATCCGCATCT ATGCCAACAG CCACTATGTC
ACGCCCGGCC CGACGCTCAA GCAGGCAACC GAAGCGATCC GCCACGAACT TGCGGAACGG
CTCAAGGAGC TGGAGGCCGA GGGGCGCCTG CTCGAAGCGC AGCGGCTCGA ACAGCGCACC
AATTTCGACC TCGAAATGAT CGCCGCGACG GGCAGTTGCG CCGGGATCGA GAATTACAGC
CGCTTTCTCA CCGGCCGCCT GCCCGGCGAG CCGCCGCCGA CCCTGTTCGA ATATCTGCCC
GACAATGCGC TGCTCTTCGT CGACGAAAGC CACCAGACGA TCCCGCAGAT CGGCGCAATG
TCAAAGGGCG ACCATCGCCG CAAGATCACC CTCGCCGAAT ATGGCTTCCG CCTGCCGAGC
TGCATCGACA ATAGGCCCTT GCGCTTCGCC GAATGGGACA TGATGCGCCC GCAGACGATC
AGCGTCTCGG CGACCCCCGG CACCTGGGAG ATGGAGCGCA CGCAGGGCGT CTTCGCCGAA
CAGGTGATCC GCCCCACCGG CCTCATCGAC CCGCCGGTCG AGATCAGGCC GGTCGAGGAA
CAGGTCGACG ACCTGATCGC CGAAGCGAAA AAGACCGCGG CAGCGGGATA CCGCACGCTG
GTGACGACTC TGACCAAGCG CATGGCCGAG GATTTGACCG AGTTTCTGCA CGAAGCGGGG
CTCAAGGTCC GCTACATGCA CTCGGACGTC GAAACGCTCG AACGCATCGA GATTATCCGC
GACCTCCGGC TCGGCGTGTT CGACGTGCTC GTCGGCATCA ACCTGCTCCG CGAAGGGCTC
GACATTCCCG AATGCGGGCT CGTCGCGATC CTCGACGCCG ACAAGGAGGG CTTTTTGCGC
AGCGAAACCA GCCTCGTCCA GACGATCGGC CGCGCCGCGC GCAACGTCGA CGGGCGCGTC
ATCCTCTACG CCGACCGCAT CACCGGCAGC ATGGAACGCG CGCTGCGCGA AACCGACCGC
CGCCGCGAAA AGCAGAAGGC GTATAACGAA GCGCACGGCA TCACCCCGAC GACGATCAAG
CGCAACATCG GCGACATCAT CGCGCATGTC GCGTCGAAGG ACGGCGTCGT CATCGACATC
GGCGAAGACA AGCCCGCGCA CATGGTCGGC CACAACCTCC GCGCCTATAT CCAGGAACTC
GAAAAGAAGA TGCGCGATGC CGCCGCCGAC CTGGAGTTCG AGGAAGCCGG GCGCCTGCGC
GACGAAATCC GCAAGCTGGA GGCCGACGAA CTGGGCCTGC CCCCCGACCA ACAGGTCGCG
CCGCGCGTGG GCCGCAGCAA CGAGGGCAAG CCGGGGACGC GCAAGGGCCG CTTCGGGAAG
CAGAGCAAGA CGAAGTGGGG GCGGTGA
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| Protein sequence | MAIQIRTSLD EIDTAEGYVP HRPARPDKVE GGKRFELVSD YEPAGDQPTA IRELVETART
GERDQVLLGV TGSGKTFTMA KVIEELQRPA LILAPNKILA AQLYGEFKSF FPNNAVEYFV
SYYDYYQPEA YVPRSDTYIE KESSVNEAID RMRHSATRAL LERDDVIIVA SVSCLYGIGS
VETYSAMIFD LKKGQVADNR EIIRKLVALQ YKRNDQAFAR GNFRVRGDSL EIFPSHYEDM
AWRVSFFGDE IEEITEFDPL TGKKIASLNS IRIYANSHYV TPGPTLKQAT EAIRHELAER
LKELEAEGRL LEAQRLEQRT NFDLEMIAAT GSCAGIENYS RFLTGRLPGE PPPTLFEYLP
DNALLFVDES HQTIPQIGAM SKGDHRRKIT LAEYGFRLPS CIDNRPLRFA EWDMMRPQTI
SVSATPGTWE MERTQGVFAE QVIRPTGLID PPVEIRPVEE QVDDLIAEAK KTAAAGYRTL
VTTLTKRMAE DLTEFLHEAG LKVRYMHSDV ETLERIEIIR DLRLGVFDVL VGINLLREGL
DIPECGLVAI LDADKEGFLR SETSLVQTIG RAARNVDGRV ILYADRITGS MERALRETDR
RREKQKAYNE AHGITPTTIK RNIGDIIAHV ASKDGVVIDI GEDKPAHMVG HNLRAYIQEL
EKKMRDAAAD LEFEEAGRLR DEIRKLEADE LGLPPDQQVA PRVGRSNEGK PGTRKGRFGK
QSKTKWGR
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