Gene Sala_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0272 
Symbol 
ID4081220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp271136 
End bp271456 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content57% 
IMG OID638008630 
ProductXRE family plasmid maintenance system antidote protein 
Protein accessionYP_615328 
Protein GI103485767 
COG category[R] General function prediction only 
COG ID[COG3093] Plasmid maintenance system antidote protein 
TIGRFAM ID[TIGR02607] addiction module antidote protein, HigA family 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.188299 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGGAT CGAGGACTAT CACCGAGGAT GACGACCGGC TGGACAATGT CCATCCCGGC 
GACATTCTGC GCCACGATTT CCTGATCGGC AGCGACATCG CCATTTCTGA GGTTGCTGAT
GGAGCCGGAA TCGCCGTTGA ACATCTCGAA GCCATTCTGG ATGCCCGGCA AGCAATCGAC
GCCAATGTTG ATCTGCGACT GGCGCGCTAC TTCGGAATGA GCGAGGGTTT TTTTCTCGGC
CTTCAGATCG ACTATGATCT GGAGGAAGAA CGCCGGGAAC ACGGGGCTGA CTTGGACAAG
ATCGTCCGTC GTGCCGCCTG A
 
Protein sequence
MSGSRTITED DDRLDNVHPG DILRHDFLIG SDIAISEVAD GAGIAVEHLE AILDARQAID 
ANVDLRLARY FGMSEGFFLG LQIDYDLEEE RREHGADLDK IVRRAA