Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0265 |
Symbol | infC |
ID | 4081213 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 266016 |
End bp | 266537 |
Gene Length | 522 bp |
Protein Length | 173 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638008623 |
Product | translation initiation factor IF-3 |
Protein accession | YP_615321 |
Protein GI | 103485760 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.910814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.332641 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGCCGC TGCCGCCCAA GAACGGCCCG CGATACAATG AATTCATTGC CTCCCCCAAA GTCCGCGTGA TCGACGAGGA AGGCGAAAAT CTGGGCGTGA TGCTGACGGC CGAAGCGATC GAACAGGCGG CCGAGGTGGG GCTTGACCTT GTCGAAGTGT CCCCCAATGC CGACCCGCCG GTGTGCAAGT TCCTCGACGT CGGCAAATAT AAATATGAGG CGCAGAAAAA GGCGAACCTG GCCCGCAAGA GCCAGAAGAC GCAGGAGATC AAGGAGATCA AGATGCGTCC GAACATCGAC GACCATGATT TCGATGTGAA GATGAAGAAG GTCTTCGACT TCCTCGAGGA AGGCGACAAG GTCAAGATGA CCATGCGTTT CCGCGGTCGC GAGATGAGCC ACACGCAGCT TGGCCTCAAC GTGCTCCAGC GCGTCGCCGA GCTGACCGCG GAGGTCGCGA AGGTCGAGGC GCACCCGCGC ACCGAAGGCC GCCAGATGCT GATGGTGCTG GCGCCGAAAT AG
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Protein sequence | MAPLPPKNGP RYNEFIASPK VRVIDEEGEN LGVMLTAEAI EQAAEVGLDL VEVSPNADPP VCKFLDVGKY KYEAQKKANL ARKSQKTQEI KEIKMRPNID DHDFDVKMKK VFDFLEEGDK VKMTMRFRGR EMSHTQLGLN VLQRVAELTA EVAKVEAHPR TEGRQMLMVL APK
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