Gene Sala_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0265 
SymbolinfC 
ID4081213 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp266016 
End bp266537 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content60% 
IMG OID638008623 
Producttranslation initiation factor IF-3 
Protein accessionYP_615321 
Protein GI103485760 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.910814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.332641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCGC TGCCGCCCAA GAACGGCCCG CGATACAATG AATTCATTGC CTCCCCCAAA 
GTCCGCGTGA TCGACGAGGA AGGCGAAAAT CTGGGCGTGA TGCTGACGGC CGAAGCGATC
GAACAGGCGG CCGAGGTGGG GCTTGACCTT GTCGAAGTGT CCCCCAATGC CGACCCGCCG
GTGTGCAAGT TCCTCGACGT CGGCAAATAT AAATATGAGG CGCAGAAAAA GGCGAACCTG
GCCCGCAAGA GCCAGAAGAC GCAGGAGATC AAGGAGATCA AGATGCGTCC GAACATCGAC
GACCATGATT TCGATGTGAA GATGAAGAAG GTCTTCGACT TCCTCGAGGA AGGCGACAAG
GTCAAGATGA CCATGCGTTT CCGCGGTCGC GAGATGAGCC ACACGCAGCT TGGCCTCAAC
GTGCTCCAGC GCGTCGCCGA GCTGACCGCG GAGGTCGCGA AGGTCGAGGC GCACCCGCGC
ACCGAAGGCC GCCAGATGCT GATGGTGCTG GCGCCGAAAT AG
 
Protein sequence
MAPLPPKNGP RYNEFIASPK VRVIDEEGEN LGVMLTAEAI EQAAEVGLDL VEVSPNADPP 
VCKFLDVGKY KYEAQKKANL ARKSQKTQEI KEIKMRPNID DHDFDVKMKK VFDFLEEGDK
VKMTMRFRGR EMSHTQLGLN VLQRVAELTA EVAKVEAHPR TEGRQMLMVL APK