| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0259 |
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| Symbol | |
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| ID | 4081207 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 260564 |
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| End bp | 261457 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638008617 |
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| Product | phage integrase |
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| Protein accession | YP_615315 |
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| Protein GI | 103485754 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.389161 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCTTCAG ATTTGATCCG CGACTGGGAT GCCCATCTGG CGCACGAAAA GCGCCGGTCG
GAGCATACGC GCCGCGCCTA TATCGCGACG GCGGAGCGTT TCTGCGCATT CCTGTCGCTG
CACCGCGGCG GCGCGGTCGA TGCGGCGATG CTGACGGCGC TGACCCCCAA CGACCTGCGC
GCATATCTCG CCGACCGCCG CGCCGAGGGG CTGGGCAATG CGTCGGCGGC GCGCGAGCTT
TCGGCGCTGC GCGCCTTCCT GCGCTTTGTC GGCGGATCGA ACGCCAGCGT CCCGCAGATG
CGCGGACCGC GCGTCAAAAA GGGGTTGCCG CGTCCCGTTT CGCCCGCCGA GGCGATGCAG
TTGGCGCAGA ATGTCGAGGA CAATGCGCGC GAGGGCTGGG TCGGCGCGCG CGATTTCGCG
CTGCTGCTGC TGCTCTATGG CGCGGGCCTG CGCATCGGGG AGGCGCTGGC GCTCACCGGT
GCGGCGATGC CGCTCGGTGA CACGCTGCGC GTCACGGGCA AGCGGAACAA GACGCGGATC
GTCCCGATCC TGCCCGCGGT GGCGAAGGCG GTGGCGCGTT ATGTCGCCGC GTGCCCCTGG
CCGATCGCCA GGGAAACGCC GCTGTTTCTC GGCGTGCGCG GCGGGCCGCT CCATCCCGGC
GTGGTGCGCG TGAGCGTCCG GTCGGCGCGG CGCGCGCTGG GGTTGTCCGA TCGGACGACG
CCGCACGCGC TGCGCCACAG TTTCGCGACG CATTTGCTGG CGGGCGGCGC CGACCTGCGA
TCCTTGCAGG AACTGCTCGG CCATGCGAGC CTCGCATCGA CGCAGATCTA TACTGCGGTC
GATGCCGCGC ATCTGCTCGA CATTTACCGG AGCGCGCATC CACGGGCGGG GTAA
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| Protein sequence | MASDLIRDWD AHLAHEKRRS EHTRRAYIAT AERFCAFLSL HRGGAVDAAM LTALTPNDLR
AYLADRRAEG LGNASAAREL SALRAFLRFV GGSNASVPQM RGPRVKKGLP RPVSPAEAMQ
LAQNVEDNAR EGWVGARDFA LLLLLYGAGL RIGEALALTG AAMPLGDTLR VTGKRNKTRI
VPILPAVAKA VARYVAACPW PIARETPLFL GVRGGPLHPG VVRVSVRSAR RALGLSDRTT
PHALRHSFAT HLLAGGADLR SLQELLGHAS LASTQIYTAV DAAHLLDIYR SAHPRAG
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