| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0248 |
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| Symbol | truA |
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| ID | 4083106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 251833 |
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| End bp | 252573 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008606 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_615304 |
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| Protein GI | 103485743 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.262775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT TCGCGCTCAC CATCGAATAT GACGGCCGGC CCTATATGGG CTGGCAGCGG
CAGGCGCACG GCCCCAGCGT CCAGCAGGCG ATCGAGGAAG CGATCCATCG CTTCACCGCC
GAGGAAGTGC AGGTGCTGAG CGCCGGGCGC ACCGACGCGG GGGTCCATGC GATCGCGATG
CGCGCGCATG TCGATATTGA AAAGCCGCTG ACCCCGTTCA AGCTGACCGA GGCATTGAAC
GCGCAGCTCC GCCCCGCGCC GATCGCGGTC ATCGGATGCG AGGTGGTGCC GGACGACTGG
CACGCGCGCT TTGCCTGCAT CGGGCGATCC TATGAATATC GCATCGTCAA CCGCCGCGCG
CCGCTGACGT GGGACAAGGG ACTGGCGTGG CAGGTCGCGC GCCCGCTCGA CGTCGACGCG
ATGCACGAAG CGGCGCAGCA ACTCATTGGC CTTCACGATT TCACGACCTT TCGCTCGGCG
CACTGCCAGT CGCAAAGCCC GGTCAAGACG CTCGATAGGC TGACCGTCAG CCGCCACGGC
GAGGAGGTCA TCATCGAGGC CGCGGCGCGC AGCTTCCTGC ACCATCAGGT GCGCTCGATG
GTCGGCTCGC TCGCGCTTGT CGGCCATGGC AAATGGTCGG CGCGCGATCT GAAGGCGGCG
CTGGAGGCGG CGGACCGGCA GGCGCTGGGG CTCAATGCAC CGCCCGACGG GCTGTATTTC
GTGGGGGCGG TTTATCCGTA A
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| Protein sequence | MTRFALTIEY DGRPYMGWQR QAHGPSVQQA IEEAIHRFTA EEVQVLSAGR TDAGVHAIAM
RAHVDIEKPL TPFKLTEALN AQLRPAPIAV IGCEVVPDDW HARFACIGRS YEYRIVNRRA
PLTWDKGLAW QVARPLDVDA MHEAAQQLIG LHDFTTFRSA HCQSQSPVKT LDRLTVSRHG
EEVIIEAAAR SFLHHQVRSM VGSLALVGHG KWSARDLKAA LEAADRQALG LNAPPDGLYF
VGAVYP
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