| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0247 |
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| Symbol | |
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| ID | 4083105 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 251077 |
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| End bp | 251604 |
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| Gene Length | 528 bp |
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| Protein Length | 175 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638008605 |
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| Product | CarD family transcriptional regulator |
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| Protein accession | YP_615303 |
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| Protein GI | 103485742 |
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| COG category | [K] Transcription |
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| COG ID | [COG1329] Transcriptional regulators, similar to M. xanthus CarD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.246568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCGCAA GCACGCTCGT CTTCGAAGTC GGTGACTATG TCGTTTATCC GAAACATGGC
GTGGGGCGCG TCATCGAATT GCAGAAATCC GAAATCGCCG GAATGCAGCT CGAACTTTAT
GTCCTGCGCT TCGAAAAGGA AAAAATGACC CTTCGCGTCC CGACCAACAA GGCCGAGGGC
GTGGGGATGC GCAAGCTGTC GTCGGACAAG ACGCTGAAGG AAGCGTTGCA GGTGCTGACC
ACCAAGCCGA AGGTCAAGCG CACCATGTGG TCGCGCCGCG CGCAGGAATA TGAAGCGAAG
ATCAATTCGG GCGACCTCGT GTCGATCGCC GAAGTGACGC GCGACCTGTT CCGCGCCGAC
GACCAGCCCG AACAGAGCTA TTCGGAGCGC CAGATCTTCG AAGCGGCGTC GAGCCGCCTC
GCGCGCGAAC TCGCCGCGAT GGAGGAAAGC GACGAAAAGA CCGCACAGGC GAAGATCCTT
CAGATCCTCA ACGAACATGC GCCGCTCTAT TACGCCGAAA AGGTGTAA
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| Protein sequence | MSASTLVFEV GDYVVYPKHG VGRVIELQKS EIAGMQLELY VLRFEKEKMT LRVPTNKAEG
VGMRKLSSDK TLKEALQVLT TKPKVKRTMW SRRAQEYEAK INSGDLVSIA EVTRDLFRAD
DQPEQSYSER QIFEAASSRL ARELAAMEES DEKTAQAKIL QILNEHAPLY YAEKV
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