Gene Sala_0244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0244 
SymbolrpsI 
ID4083103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp249372 
End bp249869 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content69% 
IMG OID638008603 
Product30S ribosomal protein S9 
Protein accessionYP_615301 
Protein GI103485740 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0103] Ribosomal protein S9 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.411662 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG AACAGACCAT GACCGATCTC AAGGACCTCG GCGGCGCCGT CGAAGGCAGT 
GTGGCAGCCC CGGTTTCGAC CACGCCGCTG CGCGAGAAGA TCGTCGACAA GCAGGGCCGC
GCCTATGCGA CCGGTCGCCG CAAGGACGCC GTTGCGCGCG TGTGGCTCAA GCCCGGCACG
GGCAAGATCA CCGTCAACGG CCGCGATCAG GAATCCTATT TCGCGCGCCC GACGCTGCGC
CTCGTCATCA ACCAGCCCTT CGGCCTGACC GAACGCGTTG GCCAGTATGA CGTGATCGCA
ACCGTCAAGG GCGGCGGCCT GTCGGGCCAG GCGGGCGCGG TGCTGCACGG CATCGCGCAG
GCGCTGACCC GTTTCGAACC GGCGCTGCGC GGCCCGGTCA AGGCGGCCGG CTTCCTGACC
CGCGACAGCC GCGCCGTCGA GCGCAAGAAG TACGGCAAGG CGAAGGCCCG CCGCAGCTTC
CAGTTCTCGA AGCGTTAA
 
Protein sequence
MADEQTMTDL KDLGGAVEGS VAAPVSTTPL REKIVDKQGR AYATGRRKDA VARVWLKPGT 
GKITVNGRDQ ESYFARPTLR LVINQPFGLT ERVGQYDVIA TVKGGGLSGQ AGAVLHGIAQ
ALTRFEPALR GPVKAAGFLT RDSRAVERKK YGKAKARRSF QFSKR