Gene Sala_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0236 
Symbol 
ID4083095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp242510 
End bp243373 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content66% 
IMG OID638008595 
ProductUTP-glucose-1-phosphate uridylyltransferase 
Protein accessionYP_615293 
Protein GI103485732 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID[TIGR01099] UTP-glucose-1-phosphate uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0791459 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCGA TCCGCAAAGC CGTTTTTCCC GTCGCCGGCC TCGGCACCCG CTTCCTGCCG 
GCGACCAAGG CGATTCCGAA GGAGATGCTG CCCGTCGTCG ACCGGCCGCT CATCCAATAT
GCGGTCGACG AAGCGCGCGA GGCGGGGATC GAGCAGATGA TCTTCGTCAC CGGCCGCGGC
AAGAGCGCGA TCGAGGATCA TTTCGACATC GCCTTCGAAC TGGAAAAGAC GATGTCGGAG
CGCGGCAAGG ATCTGTCGGT GCTGACGCCC ACGCGCCTCG GCCCCGGCGC CTGCGCCTAT
GTCCGCCAGC AGGAACCGAT GGGGCTGGGT CACGCCATCT GGTGCGCGCG CGACATCGTC
GGTGACGAGC CCTTTGCCAT CTTCCTGCCC GACGAGTTCA TGCACGGCAT CCCCGGCTGC
ATGAAGCAGA TGGTCGATGC CTATGCGCGC GTCGGCGGCA ATCTGATCTC GGTCCTCGAA
GTGCCGCACG AACAGGTGTC GAGCTATGGC GTGATCGCCC CCGGCGCGCG CGACGGCGCG
CTTACCGAGG TCAAGGGGCT GGTCGAGAAG CCACCGGTTG CCGAAGCGCC GTCCAATCTC
ATCATCTCGG GCCGCTACAT CCTGCAACCC GAAGTCATGC GCGTGCTCGA ACGCCAGGAG
AAGGGCGCCG GCGGCGAAAT CCAGCTCACC GACGCCATGG CGACGATGAT CGGCGCGCAG
CCCTTCCACG CCGTGACCTT CGCCGGCGCG CGCTACGATT GCGGGTCGAA GGCAGGCTAT
ATCCAGGCCA ATCTGGCGGT CGCGCTCGAA CGCCCCGACA TTGCGGCCGA CGTCCGCGCC
TTCGCCATCG ACCTGCTCAA ATAG
 
Protein sequence
MKPIRKAVFP VAGLGTRFLP ATKAIPKEML PVVDRPLIQY AVDEAREAGI EQMIFVTGRG 
KSAIEDHFDI AFELEKTMSE RGKDLSVLTP TRLGPGACAY VRQQEPMGLG HAIWCARDIV
GDEPFAIFLP DEFMHGIPGC MKQMVDAYAR VGGNLISVLE VPHEQVSSYG VIAPGARDGA
LTEVKGLVEK PPVAEAPSNL IISGRYILQP EVMRVLERQE KGAGGEIQLT DAMATMIGAQ
PFHAVTFAGA RYDCGSKAGY IQANLAVALE RPDIAADVRA FAIDLLK