Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0232 |
Symbol | |
ID | 4083012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 239198 |
End bp | 239866 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008591 |
Product | putative phage repressor |
Protein accession | YP_615289 |
Protein GI | 103485728 |
COG category | [K] Transcription |
COG ID | [COG2932] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.407354 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGACC CAGTTCACGA CCCGCGCGCC GCGCTCGACC GGCTATTGTC CGAAAAGGGC GTCGATTATG CACGCCTGTC ACAGGTGATC GGGCGCAATC CCGCCTATAT TCAGCAATAT ATCAAGCGGG GCTCGCCGCG GCGGCTGGCC GAACAGGATC GCGCGCGCAT CGCCGCCTAT CTGGGGGTGT CGGAGGCGAT GCTGGGCGGG CCGGTGGCGC GCGTCGCCAC CCCGGCGCGG AGCCGCGGGG CGGGGATGAT CCTGGTGCCC AAGCTCGCGA TCGGGGCGTC GGCGGGCGCG GGTGCCAGCG TCGATGGCGA GCCGGTCGAG GGTGAGGTCG CCTTCAACCC CAAATGGCTG CGCGACCTTG GCGCCGATCC GCGCGCGCTC AGCATCATCC GCGTTGAGGG CGATTCGATG GCGCCGACGC TCGACGATGG CGACGATATC CTCGTCGATG GCAGCGATGC GGCGGCGCGG CTGCGCGACG GCATCTATGT GCTGCGCATG GACGATGTGC TGATGGTCAA GCGCATCGCG CGCGCGCCGG GGCCGGGGCG CGTGTCGGTC ATCAGCGACA ATCCGCATTA CCGCAGCTGG GACGACCTGC CTTTGTCGGC GATCCGGCTC GTCGGGCGCG TGGTGTGGAC GGGGCGGCGG GTCCGGTAA
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Protein sequence | MIDPVHDPRA ALDRLLSEKG VDYARLSQVI GRNPAYIQQY IKRGSPRRLA EQDRARIAAY LGVSEAMLGG PVARVATPAR SRGAGMILVP KLAIGASAGA GASVDGEPVE GEVAFNPKWL RDLGADPRAL SIIRVEGDSM APTLDDGDDI LVDGSDAAAR LRDGIYVLRM DDVLMVKRIA RAPGPGRVSV ISDNPHYRSW DDLPLSAIRL VGRVVWTGRR VR
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