| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0203 |
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| Symbol | |
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| ID | 4082119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 217574 |
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| End bp | 218833 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008562 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_615260 |
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| Protein GI | 103485699 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.628049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATT TTGAATATCG TGACGGCGTC CTCCACGCCG AAGACATCCC GCTGCCGCGT
ATTGCCAAGG AAATCGGCAC CCCCGTCTAT GTCTATTCGC GCGCGACGCT CGAACGCCAC
GCGCAGGTGT TCGCCGACGC GCTCAGGGAT ATTCCCAGGA AGCACATCGC CTTTGCGATC
AAGTGCAACC CCAACCTTGG CGTGCTGCGC GTCCTCGCGC GGCAGGGCTA TGGCGCCGAC
GTCGTGTCGG GCGGCGAACT CGAACGCGCG CTCGCCGCGG GCATGGCGGC GGAGGACATC
GTTTTTTCTG GGGTCGGCAA GACGCGCGCC GAGCTGGCGC AGGGGCTCGA CCGCGGCATC
GGCCAGTTCA ACATCGAGCA TGAACCCGAG GGCGTCGCGC TGTCCGAAAT CGCGGTGGCG
AAGGAAATGA CCGCGCGCGC GGTGCTGCGC GTCAATCCCG ACGTCGATGC CGGCACCCAC
GCCAAGATTT CGACCGGCAA GGCCGAAAAC AAGTTCGGCG TCGGCATCGA TTCGGCGCCC
GCGATCTTCG ACCGGCTCTC GGCGTTGCCG GGGCTCAAGA TGCGCGGCGT CGCGCTCCAT
ATCGGCAGCC AGCTCACCAG CCTCGATCCG TTGGAGGCCG CGTTCGAGCG CGTCGGCCGC
CTCGTCGCCG ACCTGCGCGC TGCGGGGCAC AGCATCACCC ACGTCGACCT CGGCGGCGGC
CTTGGTGTCC CCTATCGGCC GGAGGACAAT CCCCCGACTC CGGCCGAATA TGGCGCGATG
GTCGCACGCG TGACAAAGGA TTGGGACGTC ACCCTGATGT TCGAGCCCGG CCGCGTCATT
GCGGGCAACA CCGGCGTGCT CCTGACCGAA GTGCTGTGGG TCAAGCCCGG CGCGACCCAC
CCCTTCGTCA TCGTCGACGC CGCGATGAAC GACCTTGCGC GCCCCGCGCT CTACGATGCC
TGGCATGATT TTGTCGCGGT GAAGCCGACG GGTGAAAAAA TGATCGCGTC GATCGTCGGC
CCGGTGTGCG AAACGGGCGA CACCTTCGCG CGCGACCGCG AAATCGACGC GGTTCAGCCG
GGCGCCCTCG CGGTGTTCCG TACCGCGGGC GCTTATGGTG CGACCATGGC CTCGACCTAC
AACAGCCGCA GCCTCGTGCC CGAGGTGCTC GTCGATGGTG ATCGCTACAT CACCGTCGCC
GACCGCATCG CCGCGGGCAC GATCATGGCG GCGGAGCGCG TCCCCGACTG GATCGATTGA
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| Protein sequence | MDHFEYRDGV LHAEDIPLPR IAKEIGTPVY VYSRATLERH AQVFADALRD IPRKHIAFAI
KCNPNLGVLR VLARQGYGAD VVSGGELERA LAAGMAAEDI VFSGVGKTRA ELAQGLDRGI
GQFNIEHEPE GVALSEIAVA KEMTARAVLR VNPDVDAGTH AKISTGKAEN KFGVGIDSAP
AIFDRLSALP GLKMRGVALH IGSQLTSLDP LEAAFERVGR LVADLRAAGH SITHVDLGGG
LGVPYRPEDN PPTPAEYGAM VARVTKDWDV TLMFEPGRVI AGNTGVLLTE VLWVKPGATH
PFVIVDAAMN DLARPALYDA WHDFVAVKPT GEKMIASIVG PVCETGDTFA RDREIDAVQP
GALAVFRTAG AYGATMASTY NSRSLVPEVL VDGDRYITVA DRIAAGTIMA AERVPDWID
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