Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0201 |
Symbol | |
ID | 4082117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 215765 |
End bp | 217171 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638008560 |
Product | argininosuccinate lyase |
Protein accession | YP_615258 |
Protein GI | 103485697 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAATA CTCCGGACAA GAGCAGCATG TGGGGCGGCC GCTTCGGTGG CGGACCGGCG GCGATCATGC AAGAGATTAA CGCCTCGATC CCCATCGACA AGCGCCTTTG GGAAGAGGAC ATCGCCGCCA GCCGCGCCCA CGCCGCGATG CTCGGTGCTT GCCGAATCAT CAGTGCCGAC GATGCGGCAG CGATCGACCG CGGTCTTGCC CAGATCGCCG AAGAATTTGC CGAAAACGGC GTGCCCGTCG ACCTCAGCCT CGAGGACATC CACATGACCG TCGAGGCGCG GCTGAAGGAG TTGATCGGCG AACCCGCCGG GCGCCTCCAC ACCGCGCGCT CGCGCAACGA CCAGGTCGCG ACCGATTTCC GCCTGTGGAC GCGTACCGCC TGCGAGCGCA TCGACGCCGG GCTCGCCGCG CTCCAGTCGG CGCTGCTTCA GCGCGCCGAC GAGCATGCCG ACAGCATCAT GCCGGGCTTC ACGCATTTGC AGGTCGCGCA GCCGGTGACG CTCGGCCACC ATCTGCTCGC CTATGTCGAA ATGGCGCGCC GCGACCGCGG CCGCTTCGCC GATGCGCGCC GCCGCCTCAA CGAATCGCCG CTCGGCGCCG CGGCGCTCGC GGGGACGGGC TTTCCTGTCG ATCGCGACGC CACCGCTGCG GCGCTCGGCT TCGACCGGCC GATGGCGAAC AGCATCGACG CGGTATCCGA CCGCGACTTC GCGCTCGAGT TCTGCGCCGC CGCGGCGATC GCCGCGATCC ACCTGTCGCG CCTTGCCGAA GAAATCGTCA TCTGGGCCAG CCAGCCCTTC GGCTTCGTCG CGCTGCCCGA TGCCTGGTCG ACGGGCAGTT CGATCATGCC GCAAAAGCGC AACCCCGACG CCGCCGAACT GGTGCGTGGG CGCGCGGGCC TGCTGCTCGG CGCCTTCCAG CGGCTCGCCG TCATCGTCAA AGGGCTGCCG CTCACCTATT CGAAAGACCT TCAGGACGAC AAGGAAACGC TCTTCGGCGC GTTCGACGCG CTCGCGCTGT CGCTCGCGGC GATGACGGGC ATGGTCGAAA CGCTGAGCTT CCGCACCGAC CGGATGCGCG CGCTCGCCGC GTCGGGCTAT TCGACCGCGA CCGACCTTGC CGACTGGCTG GTGCGCGAGG CGGGGCTGCC GTTCCGCGAA GCGCATCATG TCGTCGGCGC CTGCGTCAGG CGCGCCGAGG AACTGGGCGT CGAGCTGCCC GCGCTGCCCG CCGCCGACGC GGCGGCGATC CACGCCGCGG TCACCCCCGA TGTCCTCGCC GCACTCACGG TCGAAGCATC GGTCGCCAGC CGCATGAGCT ATGGCGGGAC CGCGCCCGAA CGGGTAAGAC AGGCCATCGC TGCGGCGCGC GCTGCCGCGG CCCAGGGACA GGATTGA
|
Protein sequence | MANTPDKSSM WGGRFGGGPA AIMQEINASI PIDKRLWEED IAASRAHAAM LGACRIISAD DAAAIDRGLA QIAEEFAENG VPVDLSLEDI HMTVEARLKE LIGEPAGRLH TARSRNDQVA TDFRLWTRTA CERIDAGLAA LQSALLQRAD EHADSIMPGF THLQVAQPVT LGHHLLAYVE MARRDRGRFA DARRRLNESP LGAAALAGTG FPVDRDATAA ALGFDRPMAN SIDAVSDRDF ALEFCAAAAI AAIHLSRLAE EIVIWASQPF GFVALPDAWS TGSSIMPQKR NPDAAELVRG RAGLLLGAFQ RLAVIVKGLP LTYSKDLQDD KETLFGAFDA LALSLAAMTG MVETLSFRTD RMRALAASGY STATDLADWL VREAGLPFRE AHHVVGACVR RAEELGVELP ALPAADAAAI HAAVTPDVLA ALTVEASVAS RMSYGGTAPE RVRQAIAAAR AAAAQGQD
|
| |