Gene Sala_0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0198 
Symbol 
ID4082114 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp213017 
End bp213952 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content64% 
IMG OID638008557 
Productalpha/beta hydrolase fold 
Protein accessionYP_615255 
Protein GI103485694 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.593906 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATCC TCCTCTTCCT GATCGTCGCG CCGCTCATCG CCCTCGCGCT CCTCTACTTC 
CTCTTTCCCG AACAGCTGGT TCGGATGATG CGCGCGCTGA TGCGCAAACG CGCGCGGGTG
GTGCGCAGGA GCATCACCGT CGACGGCCGA AACTGGCCCT ATCTCGAGGG CGGCGATCCG
TCGAAGCCCA CCCTCGTGAT GGTCCATGGC TTCGGCGCCG ACAAGGATCA CTGGATCTTC
TACGCGCCGT GGATGACGCG CGATTACCAC CTGATTGCGC CCGACCTGCC GGGTTTTGGG
GAGAATGACC GCGACGGCGC ACTGCCTTTC GACGTCGCGA GCCAGGCGGC ACGGCTCAAG
GCCTTCCTCG ACGCGCTCGG CGTCGACCGT CCGCACCTCG GCGGCAACAG CATGGGCGGC
TGGATCGCGC TGCGCTTTGC CATCGACTAT CCCGATCGCC TGCGCACGCT GACCCTGATG
AACAATGCCG GCGTTGTCGG CGAAAACGAA AGCGAGCTGC AAAAGCTCGC CGCGACCCGT
GATTATAACC CGCTCGTGCT TGCGAACCTC GACGACGCCG ATCGCCTCAT TGCCTTCGTC
GTGCGCAAGC CGACCTATGT GCCCGCGCGG CTGAAGCCCG TGATCTACGC CGATGCGCTC
CGCCATCGCG AACTGCTCGA CCGGATTTTC TGGATCATCG CCGACGAGAT GGAACAGGCG
CCGCTCAACG GCGAACTGGA CAAGGTGACG GTGCCGACGC TCATCCTCTG GGGCCGCCAC
GACAAGCTGA TCGACGTCAG CTGCGTCGCG GTGCTCGAAA AGGGCATCGC GAACAGCCGC
GCGCATATCT TCGAACATGT CGCGCACGTC CCGATGATCG AGGATCCGAA AGCGACCGCC
GAAGTGCAGC GCGCGTTTCT CGCCGACCAT CCCTGA
 
Protein sequence
MKILLFLIVA PLIALALLYF LFPEQLVRMM RALMRKRARV VRRSITVDGR NWPYLEGGDP 
SKPTLVMVHG FGADKDHWIF YAPWMTRDYH LIAPDLPGFG ENDRDGALPF DVASQAARLK
AFLDALGVDR PHLGGNSMGG WIALRFAIDY PDRLRTLTLM NNAGVVGENE SELQKLAATR
DYNPLVLANL DDADRLIAFV VRKPTYVPAR LKPVIYADAL RHRELLDRIF WIIADEMEQA
PLNGELDKVT VPTLILWGRH DKLIDVSCVA VLEKGIANSR AHIFEHVAHV PMIEDPKATA
EVQRAFLADH P