Gene Sala_0194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0194 
Symbol 
ID4082303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp206601 
End bp208952 
Gene Length2352 bp 
Protein Length783 aa 
Translation table11 
GC content67% 
IMG OID638008553 
Productglycerol-3-phosphate acyltransferase 
Protein accessionYP_615251 
Protein GI103485690 
COG category[I] Lipid transport and metabolism 
COG ID[COG2937] Glycerol-3-phosphate O-acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGACG GCTCGCCCCG CACCCCGATC GTGACGGAGC AGGCGGCCGA CCGGCTCTAC 
ATCATCGATG CACGTAACGG GGTCGAACGC CGCATCCTGC TCGACTGGAT TCACGCGACG
TCGGACGGTG CCGGGAGCGA CGACGAACCG GGCTGGGCGA GCCTCGACAT CGAGGACGGC
GATCACGCGC TGCCCGTCGA CGTTTTGCAG GCGCGGCTCG GCGCGACGCC CTCGCGGCTC
GTCGTTCCGC TGCGCGTCGC ATGGCGCATC CCCGGCTTCG ACAAGGGCCG CGCGCTCAAG
TTTCGCCACC TGATCTTCGG CGACCCGCGC CATCCGGGTT CGCTGCGCGC GCGGCTGATC
CTGCTCCGCG ATCGCCGCCG AGCGCAGATA TTGGTGGGGG AGGCGGCGAC GCTCGACGCG
CTGCGTAGCC GTTTCTGCGC ACAGACCGGC GGTGGCGATG GCGAAGGCGC GGATAGCCCC
GAATTCGCAC GTTTCGTCGC GCGGCAGGCG GCATTGGCGC TCGACGTCGC CGAGCGCGGC
ATCCGGGGAA CGCGCTACAA GGTGCCGCGC TTCGTCGCCG ATGGGCTCCG CACCAGCCCC
AAGTTCCGCG CGGCGCTCGC CGACCTCGCA GAGAAGACGG GCCGCCCCGT CGCCGACCTG
TTTCGCGAAG CGCGGCCGCT GATGAAGGAA GTGATCGCGC GGCCCAGCGC GCTTTTTCTC
GACCTCCGGG CCCGGCTCGA TCGCATGATG TTCGGCGGCT ATGCGCCGGA TATGGAGATC
GACGCCGCTG AACTGGCGAA GCTGCGGGGT ATCCTGCGCG AACATCCCAC CTGCATCCTC
TTTACGCACA AAACCTATAT CGACGGCGCG ACGCCAAGCC GACTGGCCTA TGAAAACGAT
CTGCCGATGC TGCACAGCTT CGGCGGCGCC AACCTCGACT TCGCCGTCAT GGGCGAATTT
TTCCGACGGT CGGGCATGAT CTTCATCCGC CGCAGCTTTC AGGACCAGCC GGTCTATAAA
CTCGTGCTGC GCCACTATAT CGCCTGGCTG CTCGCCAAGC GCTTTCCGCT GAGCTGGGCG
TTCGAGGGAA CCCGCTCGCG GCTCGGCAAG CTGATGCCGC CGAAGTACGG CCTGATGAAA
TATGTCCTCG ACGCCGCCCA CGCCACCGGC ACGCGCGGCG TCCATTTCAT CCCCTTCGTC
ACCAGTTTCG ACCTCATTCG CGATGTCGAG GAATATGCCG CCGAACAGAC CGGCCGCAAC
AAGAAGCCCG AAAGCCTGTC GTGGTTCATC GGCTATATGA AAAGCCTGAA GGAGCCGTCG
GGGCGCATCC GGCTCGACAT CGGCGATCCT GTGGTCATCG ACACCGCGCC CGGTCCCGAC
GACAGGCGCG CGCTCGAAAA GATCGCCTTT GCCGTCGCGG TCGAGGCGAA CCGCGTCACC
CCGCTCACGG TCACCTCGGT GATGTGCCTG ATCCTGCTCG GCATGGCGCC GCGCGGCGCG
ACGTCGGCCG AACTGCTCGG CGCGATCGGC GCGGTGACCG GCTGGGCGCG GGCGCGCGGC
ATCAGGCTCA GCAGTGAACT CGAAAGCGGC GGCGATGCCG CGCTCTCGGC GACCATCGAC
ACGCTCGTCA CCAGCGGCCT GCTCGCGCGT TATGAAGCGG GCAGCGAGAC GATCTATTCG
ATCGACCCCG CCAAGCATCC GATGGCGAGC TATTACCGCA ACATCATCGC GCATCATTTC
CTGGGTCGCG CGATGATCGA ACTGGCGCTG TTCGCGCTGC GCGACGCCGA CAGCGGCGAT
GCGACCGCTG CCTTCTGGGA CAGGATCGAC CGATTGCGCG ACCTGTTCAA ATTCGAATTT
TTCTACCCGC CGCGTGACGA GCATATGGCG TCCTTGCGCG CCGAACTGAC ACGCATCGAC
CCCGTGTGGG ATCGCCGCCT CGCCAGCGGC GACCGCGGTA TCGCGCAGCT CATCCGTCGC
TGCCAGCCCG TTGTCGGCCA CGCGATATTG CTGCCCTTTG CCGAGGCTTA TTCGGTCGTA
GCCGAGCTGC TCGCGCGCGC GCGGCCGGGC GATGCGGTCG ATGAAAAAAC CCTGCTCGAC
GCCGCGCTGG TCGAAGGCAA ACAGGCCTAT CTGCTGCGCC GGATCAGCAG CGAGGCGGCG
ATCGGAAAGC TGCTCTTCGC CAACGGTCTG TCGCTGATGC GGCATATGGG GCTGGCCGAC
GAGGCGACGC CGGAGATTAT CGCGCAGCGC CGCGCGCTGC TGATGGAACT GCGCGGCCTT
GCCAATGTCA TGGAAACGAT GCGCCTGTCG ACGGTCGCGC TCGCCGATCG CTTGATGGGG
GCGGGGGAAT GA
 
Protein sequence
MPDGSPRTPI VTEQAADRLY IIDARNGVER RILLDWIHAT SDGAGSDDEP GWASLDIEDG 
DHALPVDVLQ ARLGATPSRL VVPLRVAWRI PGFDKGRALK FRHLIFGDPR HPGSLRARLI
LLRDRRRAQI LVGEAATLDA LRSRFCAQTG GGDGEGADSP EFARFVARQA ALALDVAERG
IRGTRYKVPR FVADGLRTSP KFRAALADLA EKTGRPVADL FREARPLMKE VIARPSALFL
DLRARLDRMM FGGYAPDMEI DAAELAKLRG ILREHPTCIL FTHKTYIDGA TPSRLAYEND
LPMLHSFGGA NLDFAVMGEF FRRSGMIFIR RSFQDQPVYK LVLRHYIAWL LAKRFPLSWA
FEGTRSRLGK LMPPKYGLMK YVLDAAHATG TRGVHFIPFV TSFDLIRDVE EYAAEQTGRN
KKPESLSWFI GYMKSLKEPS GRIRLDIGDP VVIDTAPGPD DRRALEKIAF AVAVEANRVT
PLTVTSVMCL ILLGMAPRGA TSAELLGAIG AVTGWARARG IRLSSELESG GDAALSATID
TLVTSGLLAR YEAGSETIYS IDPAKHPMAS YYRNIIAHHF LGRAMIELAL FALRDADSGD
ATAAFWDRID RLRDLFKFEF FYPPRDEHMA SLRAELTRID PVWDRRLASG DRGIAQLIRR
CQPVVGHAIL LPFAEAYSVV AELLARARPG DAVDEKTLLD AALVEGKQAY LLRRISSEAA
IGKLLFANGL SLMRHMGLAD EATPEIIAQR RALLMELRGL ANVMETMRLS TVALADRLMG
AGE