Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0192 |
Symbol | |
ID | 4082301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 204199 |
End bp | 204819 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638008551 |
Product | 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase |
Protein accession | YP_615249 |
Protein GI | 103485688 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.396468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACA GCGGTATCGA GCAGATCATG ACCCTCGCGC CGGTCATCCC GGTGATCGTG ATCGACCGCG TCGAGGATGC GGTGCCGATG GCCGAGGCGC TGGTCGCGGG CGGGCTCCGC GTGCTTGAGG TGACGCTGCG GACCCCCGCC GCGCTCGACG CGATCCGCGC GATGAAAAGG GTTCCGGGCG CGGTGGTCGG CGCGGGCACC GTGCTCAATC CCCGGATGCT CAAGGATGCG CTGGACGCGG GCAGCGAGTT CATCGTCTCG CCTGGTCTCA CCGACAGCCT GGGCGAGGCG GCGGTAGCGA GCGGCATTCC CTTCCTTCCC GGCGTCGCCA ATGCGTCGAA CGTGATGATG GGGCTCGACA TGGGGTTGGG CAGCTTCAAA TTTTTCCCCG CGGCGACGAG CGGCGGCATT CCGGCGCTGA AGGCGCTCGC GGGTCCTTTC GGCGGGGTCA ATTTCTGCCC CACCGGCGGC ATCAGCGCCG CAACCGCGCC CGAATGGCTC GCGCTCGAAC CCGTGCGCTG CGTCGGCGGC AGCTGGGTCG TTCCGGCGGG GCCGCTCGAT CCGGTGCGGA TCGAAGCATT GGCGAAGGAA GCGGCGGCGC TTCGGACCTG A
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Protein sequence | MSDSGIEQIM TLAPVIPVIV IDRVEDAVPM AEALVAGGLR VLEVTLRTPA ALDAIRAMKR VPGAVVGAGT VLNPRMLKDA LDAGSEFIVS PGLTDSLGEA AVASGIPFLP GVANASNVMM GLDMGLGSFK FFPAATSGGI PALKALAGPF GGVNFCPTGG ISAATAPEWL ALEPVRCVGG SWVVPAGPLD PVRIEALAKE AAALRT
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