Gene Sala_0192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0192 
Symbol 
ID4082301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp204199 
End bp204819 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content69% 
IMG OID638008551 
Product2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 
Protein accessionYP_615249 
Protein GI103485688 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase 
TIGRFAM ID[TIGR01182] Entner-Doudoroff aldolase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.396468 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCGACA GCGGTATCGA GCAGATCATG ACCCTCGCGC CGGTCATCCC GGTGATCGTG 
ATCGACCGCG TCGAGGATGC GGTGCCGATG GCCGAGGCGC TGGTCGCGGG CGGGCTCCGC
GTGCTTGAGG TGACGCTGCG GACCCCCGCC GCGCTCGACG CGATCCGCGC GATGAAAAGG
GTTCCGGGCG CGGTGGTCGG CGCGGGCACC GTGCTCAATC CCCGGATGCT CAAGGATGCG
CTGGACGCGG GCAGCGAGTT CATCGTCTCG CCTGGTCTCA CCGACAGCCT GGGCGAGGCG
GCGGTAGCGA GCGGCATTCC CTTCCTTCCC GGCGTCGCCA ATGCGTCGAA CGTGATGATG
GGGCTCGACA TGGGGTTGGG CAGCTTCAAA TTTTTCCCCG CGGCGACGAG CGGCGGCATT
CCGGCGCTGA AGGCGCTCGC GGGTCCTTTC GGCGGGGTCA ATTTCTGCCC CACCGGCGGC
ATCAGCGCCG CAACCGCGCC CGAATGGCTC GCGCTCGAAC CCGTGCGCTG CGTCGGCGGC
AGCTGGGTCG TTCCGGCGGG GCCGCTCGAT CCGGTGCGGA TCGAAGCATT GGCGAAGGAA
GCGGCGGCGC TTCGGACCTG A
 
Protein sequence
MSDSGIEQIM TLAPVIPVIV IDRVEDAVPM AEALVAGGLR VLEVTLRTPA ALDAIRAMKR 
VPGAVVGAGT VLNPRMLKDA LDAGSEFIVS PGLTDSLGEA AVASGIPFLP GVANASNVMM
GLDMGLGSFK FFPAATSGGI PALKALAGPF GGVNFCPTGG ISAATAPEWL ALEPVRCVGG
SWVVPAGPLD PVRIEALAKE AAALRT