| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0191 |
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| Symbol | |
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| ID | 4082300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 202109 |
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| End bp | 204100 |
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| Gene Length | 1992 bp |
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| Protein Length | 663 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638008550 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_615248 |
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| Protein GI | 103485687 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.970836 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCGCGCA GCGCCTGGGC GCAGTTGGAT GAGGGTCGCT GCCGTCGCTT TCGCCGCTGC
CGTTCACACC CTCACCCAGC TTCGACTAGC GAGCAAGCTC GCAAGTCTGC GCATCCCTCT
CCCCCAAGGG GGGAGGATTT TGGAATTGTC ATGACCCCCC TCCATCCCAC CATCGCCGCC
GTCACCGACC GCATCATCGC CCGCAGCGCC CCGCGCCGCG CCGCATATCT CGACCTGATG
GACCGTCAGC GCGACGCCGG CACCAACCGC GGCAATCTGT CGTGCGGCAA TCTCGCCCAC
GGCTTCGCCG CCGCGGGCGA TGACAAGCCC GTCATCCGCA CCGGCGCCGC GATGAATATC
GGCATCGTCA CCGCCTATAA CGACATGCTT TCGGCGCATC AGCCCTATGG CCGCTATCCC
GAACAGATCA AACTCTTCGC GCGCGAGGTC GGCGTGACGG CGCAGGTCGC GGGCGGCGTG
CCGGCGATGT GCGACGGGGT GACGCAGGGG CAGGCGGGCA TGGACCTGTC GCTGTTCAGC
CGCGACAATA TCGCGCAGGG CACCGTCATC GCCCTCAGCC ATGCGATGTT CGAGGGCGCG
CTCCTGCTCG GCATCTGCGA CAAGATCGTC CCCGGCCTGC TCATCGGCGC GCTGCGGTTC
GGCCATCTGC CGCAGATCCT TGTTCCCGCC GGGCCGATGC CGTCGGGGCT CGCGAACAAG
GAAAAGCAGC GCGTGCGCCA GCTTTATGCA GAGGGCAAGG CGACCCGTGA CGAACTGCTG
GAGGCCGAGG CGGCGAGCTA TCATGGCGCG GGCACCTGCA CCTTCTATGG CACCGCCAAC
TCGAACCAGA TGATGATGGA GCTGATGGGG CTGCACATCC CCGGCAGCGC CTTCACCAAT
CCGGGAACGA AGCTGCGGCA GGCGCTGACG CGCGCCGCGA CGCACCGGAT TGCGCAGATC
GGCTGGGACG GCGACGATTA TCGCCCGCTT GGCCGCTGCA TCGACGAAAA GGCGATCGTC
AACGCCGCGA TCGGCCTGCT CGCGACGGGC GGCTCGACGA ACCATGCGAT CCATCTGCCC
GCGATCGCCC GCGCCGCAGG GATCATCATC GACTGGCAGG ATTTCGACGA GCTCAGCCAC
GCGGTGCCGC TGCTCGCGCG CGTCTATCCG AACGGCGCGG GCGACGTGAA CCAGTTTCAC
GCCGCGGGCG GCATCGGCTT CGTCGTGCGC GAGCTGCTGG GTGCGGGATT GCTGCACGGC
GATGTGCTCA CCGTTGGCGG GACGATGGCG GACTATGCCG CCGAACCCGT GCTGGTGAAT
GACGAACTTC ACTGGCAAGC CGCCCCCGGC CAGAGCCGCG ACGACACTAT GCTGCGCCCC
GTCGCCGATC CTTTCTCGCC CGATGGGGGG ATGCGCCTGC TGACCGGCAA TCTCGGCCGC
GCGATCATCA AGACGAGCGC GGTCGCCGAA GATCGCTGGA CGATCGAGGC GCCGGCCCGG
ATCTTCGACG ACCAGAATCA GGTTCTCGCG GCCTTCAAGG CAGGCGAGCT TGATCGCGAC
GTTGTCGTCG TCGTCCGCTT TCAGGGGCCG CGTGCGAACG GCATGCCCGA ACTCCACAAG
CTGACCCCGG CGCTCGGCGT GCTTCAGGAC AAGGGCTACC GCGTCGCGCT GCTGACCGAT
GGCCGCATGT CGGGCGCCAG CGGCAAGGTT CCCGCCGTCA TTCATCTGTC GCCCGAAGCC
TTGCCCGGCC CTGACGGGAT GAGTGGCCCG CTCGCCTATC TCCGGGACGG CGACATGGTG
CGTGTCTGCG CGGTGAGGGG CGAAGTCGCC GCGCTGGTTG ACGAAACCGA ATGGGCTGCG
CGAAGTCCCG CTGCCGCGCC GCCCCCCGCG GTGGGTGTCG GCCGCGAGCT GTTCGCGCTG
TTCCGCCATC ACGCCGACGA GGCGGAGAAG GGCGGATCGG CGGTGCTCGC GGCGATGGAG
GCTGTGACTT AA
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| Protein sequence | MARSAWAQLD EGRCRRFRRC RSHPHPASTS EQARKSAHPS PPRGEDFGIV MTPLHPTIAA
VTDRIIARSA PRRAAYLDLM DRQRDAGTNR GNLSCGNLAH GFAAAGDDKP VIRTGAAMNI
GIVTAYNDML SAHQPYGRYP EQIKLFAREV GVTAQVAGGV PAMCDGVTQG QAGMDLSLFS
RDNIAQGTVI ALSHAMFEGA LLLGICDKIV PGLLIGALRF GHLPQILVPA GPMPSGLANK
EKQRVRQLYA EGKATRDELL EAEAASYHGA GTCTFYGTAN SNQMMMELMG LHIPGSAFTN
PGTKLRQALT RAATHRIAQI GWDGDDYRPL GRCIDEKAIV NAAIGLLATG GSTNHAIHLP
AIARAAGIII DWQDFDELSH AVPLLARVYP NGAGDVNQFH AAGGIGFVVR ELLGAGLLHG
DVLTVGGTMA DYAAEPVLVN DELHWQAAPG QSRDDTMLRP VADPFSPDGG MRLLTGNLGR
AIIKTSAVAE DRWTIEAPAR IFDDQNQVLA AFKAGELDRD VVVVVRFQGP RANGMPELHK
LTPALGVLQD KGYRVALLTD GRMSGASGKV PAVIHLSPEA LPGPDGMSGP LAYLRDGDMV
RVCAVRGEVA ALVDETEWAA RSPAAAPPPA VGVGRELFAL FRHHADEAEK GGSAVLAAME
AVT
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