| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0184 |
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| Symbol | |
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| ID | 4082293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 191345 |
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| End bp | 192988 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008543 |
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| Product | alpha amylase, catalytic region |
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| Protein accession | YP_615241 |
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| Protein GI | 103485680 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.341726 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACACCCT ACCAGCCCCT TGCCCAGGAC CAGCTTGCGC CCGCCGCGGA TGCCGACACC
CCATGGTGGA AGGGGGCGGC GATCTATCAG GTCTATCCGC GCAGCTTTGC CGATTCGAAC
GGCGACGGTG TGGGCGACCT TGCGGGGATC ACCGCAAGGC TCGACCATAT CGCCTCGCTT
GGTGTCGATG CGATCTGGCT GTCGCCCTTC TATCCCTCGC CGATGGACGA TTTCGGATAC
GACATCGCCG ATTATTGCGG TGTCGATCCG ATCTTCGGGA CGCTCGCCGA TTTCGACGCA
CTGGTGGCGC GCGCGCATGC GCTGGGGCTG AAGGTCACCA CCGACCTCGT GTTCGCGCAC
ACCTCCGACC GGCACGCCTG GTTTGCGGAG AGCCGCGCGA GCAAGGATAA TGACAAGGCC
GACTGGTATG TCTGGGCCGA CGCGCGGGCG GACGGTTCGC CGCCGACCAA CTGGCAGTCG
GTGTTCGGCG GTCCGGCGTG GACGTGGGAC GCGCGCCGCG GCCAATATTA TATGCACAAT
TTCCTGAGCT CGCAGCCGCA GCTCAACGTC CACAACCGCG ATGTACAGGA CGCGCTGCTC
GGCGTCGTGC GCTTCTGGCT CGACCGCGGC GTCGACGGCT TTCGCATCGA CGCGATCAAT
TTCGCGATGC ACGACCCCGA GTTTCGCGAC AATCCGCCCG CGCCGCCGTC GAACAAGGTC
CGCACGCGCC CCTTCGATTT CCAGCAGAAA ATCTATAACC AGTCGCACCC CGACATTGCG
CTCTTCCTCG AACGCATCCG CGCGCTCACC GACGAGCGCG AGGGGTGCTT CACCGTGGCC
GAGGTCGGCG GCGACGATGC GATGCGCGAA ATGAAGCTCT TCACGGCGGG CGAGACGCGC
CTCAACAGCG CCTATGGCTT CGACTTTCTC TATGCCGACC GGCTGACGCC GCAACTCGTG
CGCGAGGCGG CCGAGGCATG GCCCGACGCG CCGGGCATCG GCTGGCCGAG CTGGGCGTTC
GAGAATCACG ACGCGCCGCG CGCGCTGTCG CGCTGGACTC CGCAAGACGT CGACCGCGAC
GCCTTTGCGC GCATGAAGAT GGCACTGCTC TGCGCGCTCC GCGGCAATAT CATCATCTAT
AATGGCGAGG AACTGGGGCT CGACCAGGTC GATATTCCCT TCGATCAGGT CAAGGATCCC
GAAGCGCGCA AGAACTGGCC GCTCACCCTG TCGCGCGATG GCGCGCGCAC GCCGCTGCCC
TGGGCGGCGG CGGCGGCGAA CGCCGGTTTT TCGGAGGCCG ACCCCTGGCT GCCGCTCGGC
CCGTCGCACC GCGATCTGGC GGTCGACCGG CAACAGGATG ATCCCGCGTC GCTGCTCAAC
CTCACGCGCC GCCTCGTTGC GCTGCGCGCC GCGCACCCCG CGCTCCGCCT CGGCGGCAAC
GCCAACTGGG TGGCCGAGGG CGACCTGCTC GCCTTCGACC GCGTCGCGGG GGAGCAGCGC
ATTCGCTGTC TTTTCAACTT CGGCGGCGGC GCGATCGGGA TTTCGGCGCT TGCCGACGGC
CGCGCGCCGC TGATCGCGCT GAACGGCGCC GACACCGCAC AGTTGCCGCC ATGCGGCGCG
CTCTGGCTCA AAATGGAAGG ATGA
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| Protein sequence | MTPYQPLAQD QLAPAADADT PWWKGAAIYQ VYPRSFADSN GDGVGDLAGI TARLDHIASL
GVDAIWLSPF YPSPMDDFGY DIADYCGVDP IFGTLADFDA LVARAHALGL KVTTDLVFAH
TSDRHAWFAE SRASKDNDKA DWYVWADARA DGSPPTNWQS VFGGPAWTWD ARRGQYYMHN
FLSSQPQLNV HNRDVQDALL GVVRFWLDRG VDGFRIDAIN FAMHDPEFRD NPPAPPSNKV
RTRPFDFQQK IYNQSHPDIA LFLERIRALT DEREGCFTVA EVGGDDAMRE MKLFTAGETR
LNSAYGFDFL YADRLTPQLV REAAEAWPDA PGIGWPSWAF ENHDAPRALS RWTPQDVDRD
AFARMKMALL CALRGNIIIY NGEELGLDQV DIPFDQVKDP EARKNWPLTL SRDGARTPLP
WAAAAANAGF SEADPWLPLG PSHRDLAVDR QQDDPASLLN LTRRLVALRA AHPALRLGGN
ANWVAEGDLL AFDRVAGEQR IRCLFNFGGG AIGISALADG RAPLIALNGA DTAQLPPCGA
LWLKMEG
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