| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0159 |
|---|
| Symbol | |
|---|
| ID | 4082917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 158935 |
|---|
| End bp | 159654 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638008518 |
|---|
| Product | nucleotidyl transferase |
|---|
| Protein accession | YP_615216 |
|---|
| Protein GI | 103485655 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.938482 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.555394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTGCGA CGATCGAAAG CGCGATGGTG ATGGCGGCGG GACTCGGCAA GCGGATGCGG
CCCTTGACCG CGACGCGGCC CAAGCCGCTG GTGCGCATCG CGGGCAAACC GCTGATCGAC
CACAGCCTCG ACCGGATCGA GGCAGCCGGC ATCGGCCATG TCGTCGTCAA CGTCCATTAT
CTCGCCGACG CGCTGGAGGC GCATCTCGCG GCGCAGAAAC GCCGCTTCAC CATCGCCATA
TCCGACGAGC GCGGGCAATT GCTCGAAACC GGTGGCGGAA TGGTCAAGGC GCTGCCGCTG
CTCACCGGCG ATCCGATCCT GATCGTGAAC AGCGACAATA TCTGGACCGA CGGGCCACAG
GACAGCATCC GCCACCTCGC GCGCCACTGG GACGACGCCG GGATGGATGC GCTGCTGCTC
GTCATCCGGC AGGCGAGCGC GACGGGGCAT CGCGGGCGCG GCGATTTCCA CATGGACCCG
GCGGGGCGGC TGTCGCGGCG CAAGCCGGGG CGGATCGCGC CCTTCGTCTA TACCGGTATC
CAGCTCGTCT CGCGACGCTT GCTGGACGGC GCGCCCGACG GGCCTTTTTC GACCAACATC
TTGTGGGACC GCGCGATCGC GGCGGAGCGG CTGTATGGCC TGTCGCACAT GGGGCAATGG
TTCGACGTCG GGACCCCGGC GAGCATCGCG CCCACCGAGG CGGCATTGAG CGAGGTTTGA
|
|---|
| Protein sequence | MSATIESAMV MAAGLGKRMR PLTATRPKPL VRIAGKPLID HSLDRIEAAG IGHVVVNVHY
LADALEAHLA AQKRRFTIAI SDERGQLLET GGGMVKALPL LTGDPILIVN SDNIWTDGPQ
DSIRHLARHW DDAGMDALLL VIRQASATGH RGRGDFHMDP AGRLSRRKPG RIAPFVYTGI
QLVSRRLLDG APDGPFSTNI LWDRAIAAER LYGLSHMGQW FDVGTPASIA PTEAALSEV
|
|---|
| |