Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0156 |
Symbol | |
ID | 4081826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 152009 |
End bp | 152329 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638008515 |
Product | thioredoxin |
Protein accession | YP_615213 |
Protein GI | 103485652 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3118] Thioredoxin domain-containing protein |
TIGRFAM ID | [TIGR01068] thioredoxin |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.534304 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTACCA AAGCCATCAC CGACGCGAGC TTCCAGGCCG ACGTGCTCGA CAGCGAGACC CCCGTCCTCG TCGATTTCTG GGCCGAATGG TGTGGCCCGT GCAAGATGAT CGGCCCCGCG CTCGAAGAGA TTTCGGACGA GCTCGCCGGC AAGGTCGTGA TCGCAAAGCT CAACATCGAC GACCATCCCG ACGCGCCGAG CAAATATGGC GTGCGCGGCA TCCCGACGAT GATCCTGTTC AAGAACGGCG AGATCGCCGA CACCAAGGTC GGCGCGGCGC CCAAAAGCGC GCTCAAGGGT TGGCTTGAGG GCGCGCTTTA A
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Protein sequence | MGTKAITDAS FQADVLDSET PVLVDFWAEW CGPCKMIGPA LEEISDELAG KVVIAKLNID DHPDAPSKYG VRGIPTMILF KNGEIADTKV GAAPKSALKG WLEGAL
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