Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0149 |
Symbol | |
ID | 4081819 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 144103 |
End bp | 145515 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008508 |
Product | glutamine synthetase, type I |
Protein accession | YP_615206 |
Protein GI | 103485645 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0174] Glutamine synthetase |
TIGRFAM ID | [TIGR00653] glutamine synthetase, type I |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACGA AGCCCAAGGA TATCATCGCC CGGATCAAGG ACAACGACAT CGAGTGGGTC GACCTGCGCT TCACCGACCC CAAGGGCAAG TGGCAGCACC TGACCATGTG CGCCGGGGTG ATCGACGAGG ATGCGCTCGA AGACGGGCTG ATGTTCGACG GTTCGTCGAT CGAGGGCTGG AAGGCGATCA ACGAAAGCGA CATGATCCTG AAGCCCGATC TCGACGCCGT CTATGACGAT CCCTTTTCGG CGACGCCGAT GCTGGTGATC TTCTGCGACA TCGTCGAGCC GTCGACCGGC GAGGGCTATG CCCGCGATCC GCGCACGACG GCGAAGCGCG CCGAGGCCTA TCTCGGATCG ACCGGCATCG GCGACACCGT CTATGTCGGC CCCGAAGCCG AATTCTTCAT GTTCGACGAT GTCCGCTTCG AAACCGGCTA TAACAAGTCG GGCTTCGAGA TCGACGACAT CGAGCTGCCG ACCAACACCG GCCGCAGCTA TGAGGGCGGC AACCTCGCCC ACCGCCCGCG CGCCAAGGGC GGCTATTTCC CCGTCGCGCC GGTCGACAGC GCGGTCGACA TCCGCGCCGA AATGGTCTCG ACGATGCTCG AAATGGGCCT GCCGTGCGAC AAGCACCACC ATGAGGTCGC CGCGGCGCAG CACGAGCTGG GCCTGACCTT CGGCACGCTG ACGCAGACCG CCGACCGTAT GCAGATCTAT AAATATGTCG TCCACCAGGT CGCGCACGCC TATGGCAAGA CCGCAACCTT CATGCCCAAA CCGATCAAGG ACGATAACGG TTCGGGGATG CACACGCACA TCTCGATCTG GGAAAAGGGC AAGCCGCTCT TTGCGGGCAA TGGCTATGCC GGTCTCAGCG ACATGTGCCT CTATTTCATC GGCGGCGTCA TCAAGCACGC CAAGGCGCTC AACGCCTTCA CCAACCCGAC GACGAACAGC TACAAGCGCC TTGTTCCGGG CTTCGAAGCG CCGGTGCTGC TCGCTTATTC GAGCCGCAAC CGCTCGGCCT CGTGCCGCAT TCCCTATGGC GCGGGCGCCA AGGCGAAGCG CGTCGAGTTC CGCTTCCCCG ACGCGATGGC GAACCCCTAT CTCTGCTATT CGGCGCTGCT GATGGCGGGG CTCGACGGCA TTCAGAACAA GATCCATCCC GGCGACGCGA TGGACAAGAA TCTCTATGAC CTGCCGCCCG AAGAGCTTTC CGAAGTGCCG ACCGTGTGCG GCAGCTTGCG TGAAGCGCTC GACAGCCTGA TGGCCGATCA CGACTTCCTT TTGAAGGGCG ACGTGTTTTC GAAGGACCAG ATCGAGGCCT ATGTCGAGCT CAAATGGAAC GAAGTCTATC GGTTCGAACA GACGCCGAGC CCGGTCGAGT TCGACATGTA TTACAGCGCC TGA
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Protein sequence | MATKPKDIIA RIKDNDIEWV DLRFTDPKGK WQHLTMCAGV IDEDALEDGL MFDGSSIEGW KAINESDMIL KPDLDAVYDD PFSATPMLVI FCDIVEPSTG EGYARDPRTT AKRAEAYLGS TGIGDTVYVG PEAEFFMFDD VRFETGYNKS GFEIDDIELP TNTGRSYEGG NLAHRPRAKG GYFPVAPVDS AVDIRAEMVS TMLEMGLPCD KHHHEVAAAQ HELGLTFGTL TQTADRMQIY KYVVHQVAHA YGKTATFMPK PIKDDNGSGM HTHISIWEKG KPLFAGNGYA GLSDMCLYFI GGVIKHAKAL NAFTNPTTNS YKRLVPGFEA PVLLAYSSRN RSASCRIPYG AGAKAKRVEF RFPDAMANPY LCYSALLMAG LDGIQNKIHP GDAMDKNLYD LPPEELSEVP TVCGSLREAL DSLMADHDFL LKGDVFSKDQ IEAYVELKWN EVYRFEQTPS PVEFDMYYSA
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