Gene Sala_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0149 
Symbol 
ID4081819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp144103 
End bp145515 
Gene Length1413 bp 
Protein Length470 aa 
Translation table11 
GC content62% 
IMG OID638008508 
Productglutamine synthetase, type I 
Protein accessionYP_615206 
Protein GI103485645 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0174] Glutamine synthetase 
TIGRFAM ID[TIGR00653] glutamine synthetase, type I 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGA AGCCCAAGGA TATCATCGCC CGGATCAAGG ACAACGACAT CGAGTGGGTC 
GACCTGCGCT TCACCGACCC CAAGGGCAAG TGGCAGCACC TGACCATGTG CGCCGGGGTG
ATCGACGAGG ATGCGCTCGA AGACGGGCTG ATGTTCGACG GTTCGTCGAT CGAGGGCTGG
AAGGCGATCA ACGAAAGCGA CATGATCCTG AAGCCCGATC TCGACGCCGT CTATGACGAT
CCCTTTTCGG CGACGCCGAT GCTGGTGATC TTCTGCGACA TCGTCGAGCC GTCGACCGGC
GAGGGCTATG CCCGCGATCC GCGCACGACG GCGAAGCGCG CCGAGGCCTA TCTCGGATCG
ACCGGCATCG GCGACACCGT CTATGTCGGC CCCGAAGCCG AATTCTTCAT GTTCGACGAT
GTCCGCTTCG AAACCGGCTA TAACAAGTCG GGCTTCGAGA TCGACGACAT CGAGCTGCCG
ACCAACACCG GCCGCAGCTA TGAGGGCGGC AACCTCGCCC ACCGCCCGCG CGCCAAGGGC
GGCTATTTCC CCGTCGCGCC GGTCGACAGC GCGGTCGACA TCCGCGCCGA AATGGTCTCG
ACGATGCTCG AAATGGGCCT GCCGTGCGAC AAGCACCACC ATGAGGTCGC CGCGGCGCAG
CACGAGCTGG GCCTGACCTT CGGCACGCTG ACGCAGACCG CCGACCGTAT GCAGATCTAT
AAATATGTCG TCCACCAGGT CGCGCACGCC TATGGCAAGA CCGCAACCTT CATGCCCAAA
CCGATCAAGG ACGATAACGG TTCGGGGATG CACACGCACA TCTCGATCTG GGAAAAGGGC
AAGCCGCTCT TTGCGGGCAA TGGCTATGCC GGTCTCAGCG ACATGTGCCT CTATTTCATC
GGCGGCGTCA TCAAGCACGC CAAGGCGCTC AACGCCTTCA CCAACCCGAC GACGAACAGC
TACAAGCGCC TTGTTCCGGG CTTCGAAGCG CCGGTGCTGC TCGCTTATTC GAGCCGCAAC
CGCTCGGCCT CGTGCCGCAT TCCCTATGGC GCGGGCGCCA AGGCGAAGCG CGTCGAGTTC
CGCTTCCCCG ACGCGATGGC GAACCCCTAT CTCTGCTATT CGGCGCTGCT GATGGCGGGG
CTCGACGGCA TTCAGAACAA GATCCATCCC GGCGACGCGA TGGACAAGAA TCTCTATGAC
CTGCCGCCCG AAGAGCTTTC CGAAGTGCCG ACCGTGTGCG GCAGCTTGCG TGAAGCGCTC
GACAGCCTGA TGGCCGATCA CGACTTCCTT TTGAAGGGCG ACGTGTTTTC GAAGGACCAG
ATCGAGGCCT ATGTCGAGCT CAAATGGAAC GAAGTCTATC GGTTCGAACA GACGCCGAGC
CCGGTCGAGT TCGACATGTA TTACAGCGCC TGA
 
Protein sequence
MATKPKDIIA RIKDNDIEWV DLRFTDPKGK WQHLTMCAGV IDEDALEDGL MFDGSSIEGW 
KAINESDMIL KPDLDAVYDD PFSATPMLVI FCDIVEPSTG EGYARDPRTT AKRAEAYLGS
TGIGDTVYVG PEAEFFMFDD VRFETGYNKS GFEIDDIELP TNTGRSYEGG NLAHRPRAKG
GYFPVAPVDS AVDIRAEMVS TMLEMGLPCD KHHHEVAAAQ HELGLTFGTL TQTADRMQIY
KYVVHQVAHA YGKTATFMPK PIKDDNGSGM HTHISIWEKG KPLFAGNGYA GLSDMCLYFI
GGVIKHAKAL NAFTNPTTNS YKRLVPGFEA PVLLAYSSRN RSASCRIPYG AGAKAKRVEF
RFPDAMANPY LCYSALLMAG LDGIQNKIHP GDAMDKNLYD LPPEELSEVP TVCGSLREAL
DSLMADHDFL LKGDVFSKDQ IEAYVELKWN EVYRFEQTPS PVEFDMYYSA