Gene Sala_0145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0145 
Symbol 
ID4081815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp140728 
End bp141693 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content66% 
IMG OID638008504 
Productthioredoxin reductase 
Protein accessionYP_615202 
Protein GI103485641 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01292] thioredoxin-disulfide reductase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCAGCA CCCACCACAC CAAGATGCTC ATCCTCGGCT CCGGCCCCGC CGGCCTGTCG 
GCCGCCATCT ATGCCGCGCG CGCGGGGATG CAGCCGATCG TCGTGCAGGG GCTGCAACCC
GGTGGACAGC TGACGATCAC CACCGATGTC GAGAACTATC CCGGATTCGC CGAGGTGATC
CAGGGGCCGT GGCTGATGGA ACAGATGACC GCGCAGGCGG TGCATGTCGG CACATCGATG
ATCTGGGACA CGATCGTCGA TGTCGATCTG TCGCAGCGTC CCTTCAAGCT GACCGGCGAC
GGCGGCGACG TCTATCTCGC CGAAACGCTT GTCATCGCGA CGGGAGCGCA GGCAAAATGG
CTCGGCGTCC CTGGCGAACA GGAACTGGGC GGCAAGGGCG TGTCGGCCTG CGCCACTTGT
GATGGCTTTT TCTATCGCGG CAAGAAGGTC GTCGTCATCG GCGGCGGCAA CACCGCGGTC
GAGGAGGCGC TCTACCTCAC CAACCACAGC GACGATGTGA CGCTGATCCA TCGCCGCGAT
TCGCTGCGCG CCGAAAAAAT CCTGCAGGAC CGCCTCTTCG CCAATCCCAA GATCAAGGTC
TTGTGGAACA AGCAGGTCGA ACGCTTCGTC GCGGGCGAGG GGGTTTCGGG CCTCGTCGGG
GTCGACCTGA TCGACACCGT CACCGGCGCG GCGAGCCACG AGCCGACCGA CGGCGGTTTC
GTCGCGATCG GCCACAGCCC CTCGACCGAG CTGTTCCGGG GCAAGCTGCC GCTCGACGCC
GACGGCTATC TGCAAGTGAC GCCCGGCACG TCGCTCACCG CGATCCCCGG CGTCTTCGCC
GCGGGCGACG TCACCGACAA AATCTATCGC CAGGCGGTGA CCGCCGCGGG CATGGGCTGC
ATGGCGGCGC TCGACGCCGA ACGCTACCTC GCCGAAGCCG AATATCACGC GATGGTGGAC
GCTTAG
 
Protein sequence
MPSTHHTKML ILGSGPAGLS AAIYAARAGM QPIVVQGLQP GGQLTITTDV ENYPGFAEVI 
QGPWLMEQMT AQAVHVGTSM IWDTIVDVDL SQRPFKLTGD GGDVYLAETL VIATGAQAKW
LGVPGEQELG GKGVSACATC DGFFYRGKKV VVIGGGNTAV EEALYLTNHS DDVTLIHRRD
SLRAEKILQD RLFANPKIKV LWNKQVERFV AGEGVSGLVG VDLIDTVTGA ASHEPTDGGF
VAIGHSPSTE LFRGKLPLDA DGYLQVTPGT SLTAIPGVFA AGDVTDKIYR QAVTAAGMGC
MAALDAERYL AEAEYHAMVD A