Gene Sala_0142 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0142 
Symbol 
ID4081812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp138017 
End bp138661 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content63% 
IMG OID638008501 
Producthypothetical protein 
Protein accessionYP_615199 
Protein GI103485638 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.913303 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCA TCCACAACAT CCGCCCGTTC AACACTCGAT ATGTAATCCG GGAACGCTCC 
AGCCGATATA CGCCCGAACT CTTGCGCACG CACCGCACGG CGCAGGCGAG CTATGCCTAC
ATCAACCGCC AGAATAGCGT CGATGAATGG GGTCCGACGC CGAACTGGGC GTCGCGCTCC
GACCTTGCGG CGGCGGGCCG ATGTGCTCCT GCCCGCGCCG CCGGACCCAA GCTGTCGGGG
ATCGCGCTCT GGGCACAAGC GGACGAGAAT GCGGTCCGGT ATCGGCCCGA CGAGCCGACA
ATCGCGCATT GCGTTGGCAG CTTGCCGCGC CATGAGGACC TCGCCTTCTG GCGCAATCTG
ATCGAAGGCT TTGCCGAGGA CTATCTCGTG GCCCGCGGCA TGGTCGTCGA CTGGGCGATC
CATCACCAAG CGGAAACCGA CGATCAGCCC GAAATCGCAC CGCACGTGCA TTTCCTCATT
ACCTTGCGAG GATATGACCC GGAGCACCGC GATTACGGCA AGGTTCGCCA GAACTGGCTG
CGGACGGACA ACTCTCGCAA GCGCCTCGCC GAGCGTTGGT GGGACCGTAC CGGAATCGTC
CCGCCCGAAT ATGTCATGGC AGCGACAGCG CAAAAATCCC GCTGA
 
Protein sequence
MTTIHNIRPF NTRYVIRERS SRYTPELLRT HRTAQASYAY INRQNSVDEW GPTPNWASRS 
DLAAAGRCAP ARAAGPKLSG IALWAQADEN AVRYRPDEPT IAHCVGSLPR HEDLAFWRNL
IEGFAEDYLV ARGMVVDWAI HHQAETDDQP EIAPHVHFLI TLRGYDPEHR DYGKVRQNWL
RTDNSRKRLA ERWWDRTGIV PPEYVMAATA QKSR