Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0132 |
Symbol | |
ID | 4082280 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 126795 |
End bp | 127478 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638008491 |
Product | hypothetical protein |
Protein accession | YP_615189 |
Protein GI | 103485628 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.299659 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGACTCCAG TCTATAATCA ATCGTTTTTG AGCGTCGCGA GTGCGGCTTT CCTGCTATCG ACACTTTCGG CTTGCGGCGG CGCATCAGGG GAAGGCGAGA AATCCGACAG TGCGGAACCG CGAACGCAAG CGGCCGTCGC TCGCGACCCC AATTATCCCG AGATCGATAT CCCGCCCGTT TGGGATGCCA AAGGACAGCT GGTCCAACCA AAAGACTTTC GCGAGTTGGT CTTCCTCGGG GCGCCGCTGA CACCGCACGG TCTTAACGGC GGGAAAGCGT CTTTTCCCGA GTTCCACAAT GTCTACACGC AGCCAGCAGC CTTCAAGGCC TATCGGGCGA CCGGCAAATG GCCTGAAGGC ACCATGATGA TCAAGGAACT ACAGCTCGTC AGTGATCCGA AAGGCGAATT TCCTGACGGA TCAACGACGG CACCATCCGG GCGAGGATAT TTTCCCGGTC CGCCCAATGG CCTCGACGTT TCAGTCAAGG ACAGCAAACG GTTCGCCGAT TCAAATGGCT GGGGCTATTT CAACTTCAAT CATTCCGCTC CGCCCTATCT GGCCACGGCA GCGCTCAAAT CCGTCGACGA ATGCGCGGGG TGCCACATCG CCAATGCAGA AGACATGGTC TACATCAAAT TCTACAAGCC CATACTCGAT CCGCTACCGC TCCCCCGCGG TTGA
|
Protein sequence | MTPVYNQSFL SVASAAFLLS TLSACGGASG EGEKSDSAEP RTQAAVARDP NYPEIDIPPV WDAKGQLVQP KDFRELVFLG APLTPHGLNG GKASFPEFHN VYTQPAAFKA YRATGKWPEG TMMIKELQLV SDPKGEFPDG STTAPSGRGY FPGPPNGLDV SVKDSKRFAD SNGWGYFNFN HSAPPYLATA ALKSVDECAG CHIANAEDMV YIKFYKPILD PLPLPRG
|
| |