Gene Sala_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0132 
Symbol 
ID4082280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp126795 
End bp127478 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content57% 
IMG OID638008491 
Producthypothetical protein 
Protein accessionYP_615189 
Protein GI103485628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.299659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTCCAG TCTATAATCA ATCGTTTTTG AGCGTCGCGA GTGCGGCTTT CCTGCTATCG 
ACACTTTCGG CTTGCGGCGG CGCATCAGGG GAAGGCGAGA AATCCGACAG TGCGGAACCG
CGAACGCAAG CGGCCGTCGC TCGCGACCCC AATTATCCCG AGATCGATAT CCCGCCCGTT
TGGGATGCCA AAGGACAGCT GGTCCAACCA AAAGACTTTC GCGAGTTGGT CTTCCTCGGG
GCGCCGCTGA CACCGCACGG TCTTAACGGC GGGAAAGCGT CTTTTCCCGA GTTCCACAAT
GTCTACACGC AGCCAGCAGC CTTCAAGGCC TATCGGGCGA CCGGCAAATG GCCTGAAGGC
ACCATGATGA TCAAGGAACT ACAGCTCGTC AGTGATCCGA AAGGCGAATT TCCTGACGGA
TCAACGACGG CACCATCCGG GCGAGGATAT TTTCCCGGTC CGCCCAATGG CCTCGACGTT
TCAGTCAAGG ACAGCAAACG GTTCGCCGAT TCAAATGGCT GGGGCTATTT CAACTTCAAT
CATTCCGCTC CGCCCTATCT GGCCACGGCA GCGCTCAAAT CCGTCGACGA ATGCGCGGGG
TGCCACATCG CCAATGCAGA AGACATGGTC TACATCAAAT TCTACAAGCC CATACTCGAT
CCGCTACCGC TCCCCCGCGG TTGA
 
Protein sequence
MTPVYNQSFL SVASAAFLLS TLSACGGASG EGEKSDSAEP RTQAAVARDP NYPEIDIPPV 
WDAKGQLVQP KDFRELVFLG APLTPHGLNG GKASFPEFHN VYTQPAAFKA YRATGKWPEG
TMMIKELQLV SDPKGEFPDG STTAPSGRGY FPGPPNGLDV SVKDSKRFAD SNGWGYFNFN
HSAPPYLATA ALKSVDECAG CHIANAEDMV YIKFYKPILD PLPLPRG