Gene Sala_0128 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0128 
Symbol 
ID4082276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp123317 
End bp124228 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content63% 
IMG OID638008487 
Productcation diffusion facilitator family transporter 
Protein accessionYP_615185 
Protein GI103485624 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3965] Predicted Co/Zn/Cd cation transporters 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00780296 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGACCGC ATTCGGAGCG CAAGGAACAA CGGCTTCTCC TGTTCTCCGC CACCGGCACC 
CTCGCCCTTT CCCTTGTTGG CATCGCTATT GGCCTGTTGA GCGGCGCAAA GTCGATCTTG
TTCGACGGTG TGTACAGCCT TGCCGACGCA GGGCTTACGC TGGCCGCCTT TTTCGCCGCG
CGGCTGATCG CGCGTGGCGC AGACCGCCGG TTCCAATATG GCTACTGGCA CATCGAGCCG
ATGCTTGGGT TCGTCAACGG CAGCGTTCTG CTCCTCGCCT GCGCCTATGC ATTGATTGAC
GGAGTAGACA CCGTGATGAT GGGAGGACGG AACGTGAGTT TCGGGCCCGG TATCGGATAT
GCCGGCGCGA GCGCGCTCAT CGGCTTCGGG ATGTATATTT ATATCCGGCG CCGCGCTCGC
GGCCTCGGGT CCTCGCTTCT GAATATCGAC GCGGCCGCGT GGCTTTTCGG CGCACTTCTC
AACGCCGGGC TGAGCGCCGC ATTTGTCACC GCGGTCGTGC TCGAGGGAAC GCAGGCGGAG
AAGCTCTCGG CCTATTTCGA TCCGGCAATC CTCATCCTCC TTGCAATCTT CCTGGCTCCG
CTTCCCCTTC GGGCCTTGGC AGCGGCCGGT CGCGAGATAC TGCAGATCGC GCCAGCCGAT
CTCGATGCGC AGGTCAGCAG CATCGCACGC GAAGTCGCGG CACGGCACGG CTTCGTCGAG
CATCAATCCT ATGTGACCCA GGTCGGCCGC GCAGGGTTTA TCGAGATCGG CTTTGTCGGT
GCCGCGGCAT CGACCACGAT GACGCTTGGC GAGCAGGACG CCATTCGTCA GGAATTTGCG
GACGCGATGG GCGGGCTGCG CCCCGGATAT TGGCTCACGA TCGACTTCAC GGCCGATCGC
CGTTGGCTCT AA
 
Protein sequence
MGPHSERKEQ RLLLFSATGT LALSLVGIAI GLLSGAKSIL FDGVYSLADA GLTLAAFFAA 
RLIARGADRR FQYGYWHIEP MLGFVNGSVL LLACAYALID GVDTVMMGGR NVSFGPGIGY
AGASALIGFG MYIYIRRRAR GLGSSLLNID AAAWLFGALL NAGLSAAFVT AVVLEGTQAE
KLSAYFDPAI LILLAIFLAP LPLRALAAAG REILQIAPAD LDAQVSSIAR EVAARHGFVE
HQSYVTQVGR AGFIEIGFVG AAASTTMTLG EQDAIRQEFA DAMGGLRPGY WLTIDFTADR
RWL