Gene Sala_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0126 
Symbol 
ID4082274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp122439 
End bp122954 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content64% 
IMG OID638008485 
Productmethionine sulfoxide reductase A 
Protein accessionYP_615183 
Protein GI103485622 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0225] Peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00401] methionine-S-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.140688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC GTTCCATCCT TGCCGGCGGC TGCTTCTGGG GCATGCAGGA CCTGATCCGC 
AAACTCCCCG GCGTCGTCAG CACCCGTGTC GGTTACAGCG GCGGCGATGT GCCGAACGCG
ACCTATCGCA ACCACGGCAC GCACGCCGAG GCGATCGAGA TCAATTTCGA TCCCGATCAG
ATCAGCTACC GCCGGATCCT CGAATTTTTC TTCCAGATCC ACGATCCGAC CACGCGCAAT
CGCCAGGGCA ACGACCGCGG CGGGAGCTAT CGCTCGGCGA TCTATTATGC CGACGAAGCG
CAGCGTGAAA CCGCGTTGCA GACGATCGCG GACGTCAACG CATCCGGCCT CTGGCCGGGA
AAGGTAGCGA GCGAGTTGGA GCCGATTGGC CCCTTCTGGG AGGCGGAGCC GGAGCACCAG
GATTATCTGG AGCGCCGTCC CAATGGTTAC ACCTGCCACT TTCCGCGCGC CGCCTGGGTC
CTTCCATCGG CCGGCGAGCG GTCTGAGGCA GCTTGA
 
Protein sequence
MTERSILAGG CFWGMQDLIR KLPGVVSTRV GYSGGDVPNA TYRNHGTHAE AIEINFDPDQ 
ISYRRILEFF FQIHDPTTRN RQGNDRGGSY RSAIYYADEA QRETALQTIA DVNASGLWPG
KVASELEPIG PFWEAEPEHQ DYLERRPNGY TCHFPRAAWV LPSAGERSEA A