| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0123 |
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| Symbol | |
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| ID | 4082271 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 119945 |
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| End bp | 120850 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638008482 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_615180 |
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| Protein GI | 103485619 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.314303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGAC TTGCCGTCAT GGAGCAGTTC CTCGCCGTGG CCGAGGCGGG TTCCTTTTCC
GCGGCGGCGC GACGGCTCAA TGTCGGTCAG CCATCGATTT CGAAAGCCGT GGCGCAGCTT
GAGGCCTATC TCGGCGTCCG GCTGTTCCAG CGCTCAACCC GCAGCCTGAC GCTCACCGAG
GCGGGCCGTC GCTACCGCGA CGGCGCCGAG CGTGCGATTG CAGCCGCCGC CGCCGCGGAG
ATTGCCGCCA AGGAAGACGG GGGCCGTCTC GCCGGACCGG TGCGCGTCGT GGTCCCGACT
TGCCTTGCCC GGCTGCATCT CGTGCCGCGT CTCCGGGAAT TCTCTGATCG CTTTCCCGAA
GTCACGCTCG ATCTGGAGAT CACCGATCGC GAAACCGATG TCGTGGCATC GGGCGTGGAT
ATCGCGCTGC GAATTGGCAC GCTCGCCGAC ACCGCGCTCG TCGCCTCTCG CATGGCGCGC
ACGCGGATGG CGCTGGTCGC GAACAAGGCC GAAAATGGTC TCGACGCCCC GCACAATTTC
ATGGGGCAGC CCGCGATCAT CTCGCGCCTT CATCATGCGA AGAATAGCTG GGTCTTCCGC
CATGGCAGCG CGCGCATCGC GATCATGGTG CATCCTGCGC TCATTCTCGA CAGCGACGAC
GCAGCCCGGT CGGCAGCGCT TGCCGGTCTC GGCTATGCGA TGTTGCCCCG GCCCTTCGTC
GCCGATCTGA TCGATACCGG CGATCTTGTC GAGTTGCTGC CCAACCATAT GCTCGAAGAC
ATTGATCTAT GGGCCCTGCT GCCGGCTGGC CGCGACCAGA CCGCGAGAGT GCGCGCTTTT
CTCGACTGGC TCCGCCCGCA GATGAACGCG ATCTTTGCCG ATGAGCGACC CGGCTTGCTC
TCATGA
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| Protein sequence | MDRLAVMEQF LAVAEAGSFS AAARRLNVGQ PSISKAVAQL EAYLGVRLFQ RSTRSLTLTE
AGRRYRDGAE RAIAAAAAAE IAAKEDGGRL AGPVRVVVPT CLARLHLVPR LREFSDRFPE
VTLDLEITDR ETDVVASGVD IALRIGTLAD TALVASRMAR TRMALVANKA ENGLDAPHNF
MGQPAIISRL HHAKNSWVFR HGSARIAIMV HPALILDSDD AARSAALAGL GYAMLPRPFV
ADLIDTGDLV ELLPNHMLED IDLWALLPAG RDQTARVRAF LDWLRPQMNA IFADERPGLL
S
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