Gene Sala_0120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0120 
Symbol 
ID4082268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp116689 
End bp117183 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID638008479 
Producthypothetical protein 
Protein accessionYP_615177 
Protein GI103485616 
COG category[S] Function unknown 
COG ID[COG3059] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.602554 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.831461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTAT TGGAGAAATA TTCATTCAGC GTCCCCGAGC ATCAAATGCG CGAACTCGCT 
CTGCTGCGAT GGGCCCTAGT CATTGTCTTT CTGTGGTTCG GCGGCATGAA ATTCACGGCT
TATGAGGCGC AAGGCATTGC CCCATTCATC GAACACAGCC CGCTTATGAG CTGGCTTCAC
CCGCTGTTCG GCGTCCAGGG CGCCAGCCAG TTCATCGGCA CGATGGAACT CGCCACGGCC
GCTGCCCTGA TCCTCGGTGC ATTCAAACCG ATTTTCTCGG TCCTCGGCGG CGCCATGTCG
GTGGCGACCT ATACCATCAC CTTGACATTC TTCTTGTCAA CGCCTGGTGT CGCAGAGCCG
ACCGCCGGCG GGTTCCCGGC CATTTCGGCC ATCCCCGGGC AATTTCTGTT GAAAGACGCC
GTTCTGCTTG CCGCTTCGCT GGTATTACTC TCGGCGGCTA TCCGACGGAA AAAGCCTGCC
GACGCCCAGG TCTAA
 
Protein sequence
MSLLEKYSFS VPEHQMRELA LLRWALVIVF LWFGGMKFTA YEAQGIAPFI EHSPLMSWLH 
PLFGVQGASQ FIGTMELATA AALILGAFKP IFSVLGGAMS VATYTITLTF FLSTPGVAEP
TAGGFPAISA IPGQFLLKDA VLLAASLVLL SAAIRRKKPA DAQV