Gene Sala_0108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0108 
Symbol 
ID4082103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp107168 
End bp107773 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content59% 
IMG OID638008468 
Productoxidoreductase, molybdopterin binding 
Protein accessionYP_615166 
Protein GI103485605 
COG category[R] General function prediction only 
COG ID[COG2041] Sulfite oxidase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.532472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCA GAGGTTTCAC CGGTCGCGGT TCAAGTGGCG ACCAGTCCGG CCGGATTCCG 
CCGGGTCAGC ATCTCGTGGA GAATTTTCCG GTTCTCACGG CGGGGCCGAC GCCGAACGTG
GAGCTGGCTG ATTGGAAATT CACCGTCAAA GTCGGCCCGA AGCCGGTCAA AGTGTGGAAC
TGGAGCGAGT TTAACGCCCT GCCAAAGACC AAGGTGACCA AGGATATTCA CTGTGTGACC
TCTTGGTCCA AGCTGGATAC CATATGGGAG GGCGTCCTCA TTGAAGACAT CCTTGCGGAT
GCAGGGCTCG ACCGGCCCAC TGATTTCGTC CTGGCGCATT CCTACGACGA TTATTCGACA
AACGTCCCGC TGGCGGACCT GCTGTCCGGG AAAGCGATGG TCGCTCTCAA ATTTGCCGGC
CAGCCGATTA CCCGCGATCA TGGCGGGCCG GCGCGTCTGC TGGTTCCGCA TCTGTACTTC
TGGAAGTCCG CCAAATGGGT GAAGGCGCTG CAATTCACAA CCCGTGACGA GGCCGGCTTC
TGGGAGCTGC GCGGCTATCA TATTTACGGC GATCCGTGGC GCGAGCAACG ATACACCGAT
GACTGA
 
Protein sequence
MVTRGFTGRG SSGDQSGRIP PGQHLVENFP VLTAGPTPNV ELADWKFTVK VGPKPVKVWN 
WSEFNALPKT KVTKDIHCVT SWSKLDTIWE GVLIEDILAD AGLDRPTDFV LAHSYDDYST
NVPLADLLSG KAMVALKFAG QPITRDHGGP ARLLVPHLYF WKSAKWVKAL QFTTRDEAGF
WELRGYHIYG DPWREQRYTD D