Gene Sala_0106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0106 
Symbol 
ID4082101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp105166 
End bp105597 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content62% 
IMG OID638008466 
Producthypothetical protein 
Protein accessionYP_615164 
Protein GI103485603 
COG category[R] General function prediction only 
COG ID[COG3193] Uncharacterized protein, possibly involved in utilization of glycolate and propanediol 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.764125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.519853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGT CCATTGCCAC TGCCTCGATC AACCGTGAAA CCGCAGTCGC CCTCATCGAC 
GCAGCGATAA CCGCCGCCCG TGCAATCGGC ATCCCGGCTG CCGTCGCCGT CGTCGACGCA
ACCGGGTATC TGCGGGCGTT CGAGCGCACC GACGACGCGC CGTTTCTCAC CGTCGATGTT
GCCATCGACA AAGCGTGGAG TTCCGCCTCC TTTGGATATC CGACCCATGT CTGGAACGAC
TATGTGAGCA ACGATCCCAA AGTGGCGCCG CTGGCCTATC GCCCCCGGAT GGTCGCCGTC
GGTGGCGGCT ATCCGATCCT TGAGGACGGA AAGCTGATCG GCGGAATCGG CATCTCCGGA
GGCACTTATC AGCAGGACCA GGATGCCTGC GTTGAGGCAC TCCAGAAAAT CGGGTTCGAA
CTGCCAGCCT GA
 
Protein sequence
MTKSIATASI NRETAVALID AAITAARAIG IPAAVAVVDA TGYLRAFERT DDAPFLTVDV 
AIDKAWSSAS FGYPTHVWND YVSNDPKVAP LAYRPRMVAV GGGYPILEDG KLIGGIGISG
GTYQQDQDAC VEALQKIGFE LPA