Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0097 |
Symbol | |
ID | 4082072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 99504 |
End bp | 100208 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008457 |
Product | glutathione S-transferase-like protein |
Protein accession | YP_615155 |
Protein GI | 103485594 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0625] Glutathione S-transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.303692 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACC TCTCGACCTT TCCTATTACG CAGCGCTGGC CCGCATTGCA TCCCGATCGC CTGCAACTCT ACGCCGCTCC CACCCCCAAT GGCGTCAAGG TCTCGATCAT GCTCGAGGAG ACCGGCCTGG CGTACGAGCC CCACCTGGTC GATATCTCGA ACAACGAGTC GAAGGATCCA GCGTTCGTAT CGTTGAACCC CAACGGCCGC ATACCGGCGA TCATCGATCC GGCTGGTCCT GACGGCAACC CTATCGCCAT ATGGGAATCG GGCGCGATCC TCCTCTACCT GGCCGACAAA ACCGGCCAGC TCAATTCGAG TGCGCCCGCG CAGCGTTACG AGACGCTGGC TTGGGTATTC TTTCAAGTAT CCGGCGTCGG GCCGACCTTC GGTCAGCTTG GTTTTTTCCT GAAATTTGCC GGCAAGGACT ATGAGGACAA GCGCCCTCGG CAGCGCTTTA TCGATGAATC CAAGCGTCTC TTGGGGGTGC TGGACCGCCA GCTCGAAGGC CGCGAATGGC TTGTCGATGA TTATTCGATC GCGGACATTG CGACACTTGG GTGGGTCAAC GCACTGGCCG AAGTCTACGC GGCCGGCGAC ATCCTCGGCC TCGGCGAATA TTCGAACGTC CAGACATGGC TCCGCCGCGG GCTGGCGCGG CCCGCGGTGC AGCGCGGCCT GCGCATCCCT GCGAGACCGG CATGA
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Protein sequence | MPDLSTFPIT QRWPALHPDR LQLYAAPTPN GVKVSIMLEE TGLAYEPHLV DISNNESKDP AFVSLNPNGR IPAIIDPAGP DGNPIAIWES GAILLYLADK TGQLNSSAPA QRYETLAWVF FQVSGVGPTF GQLGFFLKFA GKDYEDKRPR QRFIDESKRL LGVLDRQLEG REWLVDDYSI ADIATLGWVN ALAEVYAAGD ILGLGEYSNV QTWLRRGLAR PAVQRGLRIP ARPA
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