Gene Sala_0092 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0092 
Symbol 
ID4082067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp95423 
End bp95848 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content59% 
IMG OID638008453 
Producthypothetical protein 
Protein accessionYP_615151 
Protein GI103485590 
COG category[R] General function prediction only 
COG ID[COG3631] Ketosteroid isomerase-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.125559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTCGAA AGGCATTGGG TGATCGTCTC GCTCCCGATG CTGCCACCTT TCTCGACATG 
GTGGCTGAAA ATGGGGTGAT GGAATTTCCT TATTCGCCGC CAGGCCTTCC GACCCGGTTG
GTTGGAAAGG CTGCTATCGC GCGTCACCTT GAAAGCCTTG GTGACATGAT AGCCTTCGAC
CGCATGGGTG AGCCGACCAT TCACGCCACG ACCGACCCCG ATGTTACCAT TGTCGAGTTC
GAAGGCTTCG GAAGCGGCGT TGCGACCGGG GAATCCTATG ACCAACGCTA CATATCCGTG
ATCCGGACGG ACGCCGGGCG GATTATGCAC TATCGCGATT ACTGGAACCC GCTGGTGGCG
CTGCGCGCGC TTCGCGGCAG CGCGGTTGTC GATGCCCTTG TCGGCGGAGC GTCAGACCAT
GGTTGA
 
Protein sequence
MLRKALGDRL APDAATFLDM VAENGVMEFP YSPPGLPTRL VGKAAIARHL ESLGDMIAFD 
RMGEPTIHAT TDPDVTIVEF EGFGSGVATG ESYDQRYISV IRTDAGRIMH YRDYWNPLVA
LRALRGSAVV DALVGGASDH G