| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0085 |
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| Symbol | |
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| ID | 4082060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 89692 |
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| End bp | 90405 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008446 |
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| Product | oxidoreductase |
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| Protein accession | YP_615144 |
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| Protein GI | 103485583 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.689145 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.340405 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAACT TTCAAGGAAA ATCCGTTCTG GTCCTCGGCG GCAGCCGCGG AATCGGCGCG
GCGATCGTCC GCCGTTTTGC GTCCGACGGC GCCAAGGTCG TCTTCACCTA CAACGGATCG
CGCGAGGCGG CCGAGCAGCT GGCGACCGAA ACCGGCACCA GCGCGGTAGC GACCGACAGC
GGCGACCGCG ACGCAGTGAT TGCACGCGTG CGCGAGAGCG GCCCGCTCGA CATACTGGTC
GTCAACGCCG GCTTCGCGCT GTTCGGCGAC GCGCTCGACC TCGATCCCGA CGACGTCGAC
CGGCTGATCC GCGTCAACGT CACCGCCCCC TATCATGCGT CGGTCGAGGC CGCGCGGCAG
ATGCCCGACG GCGGCCGCAT CATCGTGATC GGTTCGGTAA ACGGCGACCG CATGCCTCTC
CCCGGCATGG CCTCCTATGC ACTGAGCAAA TCGGCGCTGC AGGGCATGGC GCGCGGACTG
GCCCGGGATT TCGGACCGCG CGGAATCACG ATCAATATCG TGCAGCCCGG CCCGATCGAT
ACCGACGCCA ACCCCGAGGA CGGACCGATG CGCGAGCTGA TGCACAGCTT CATGGCGATC
AAGCGCCACG GGCGGCCCGA AGAGGTCGCT GGCATGGTTG CTTGGCTGGC TGGCCCCGAA
GCGGGTTTTG TCACTGGCGC CATGCACACG ATCGACGGCG CATTTGGTGC CTGA
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| Protein sequence | MSNFQGKSVL VLGGSRGIGA AIVRRFASDG AKVVFTYNGS REAAEQLATE TGTSAVATDS
GDRDAVIARV RESGPLDILV VNAGFALFGD ALDLDPDDVD RLIRVNVTAP YHASVEAARQ
MPDGGRIIVI GSVNGDRMPL PGMASYALSK SALQGMARGL ARDFGPRGIT INIVQPGPID
TDANPEDGPM RELMHSFMAI KRHGRPEEVA GMVAWLAGPE AGFVTGAMHT IDGAFGA
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