| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0078 |
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| Symbol | |
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| ID | 4082151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 83846 |
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| End bp | 84697 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638008439 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_615137 |
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| Protein GI | 103485576 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.406068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAA CATATTTCGT GACCGGCAGC TCGGTCGGAC TCGGCCGCTC GATAGTGGAG
GCCGCGCTCG CGCAAGGCCA CAATGTCGTT GCGACGGCCC GTAACCCCGC AGTTCTTGAA
GACCTGGCCG CGCGCTATTC CGGGCAATTG CTGGCCGTGA GGCTCGATGT CACAGATGCC
GAGGGTGCGC GCGACGCTGT CCGGCAAGCT GTTGATAAGT TCGGACGCCT CGATGTCTTG
ATCAACAATG CCGGCTTTTC GGGCGTCGGG TCGATCGAAG ATATGCCGCT CGAACTCATC
GAGGCACAGC TGTCGACCAA TTTCCTTGGC GCGGTCAATC TGACCCGGGC GGTGCTCCCG
ACGATGCGGG CACGGGCGCG CGGTCGCATC CTGCTTGTCT CTTCCATCGG GGCACGTATC
GCCACCGCAG GGGCCGGCGT CTATTATGCG TCCAAGGCCG CGGTCTCGGC GCTTGCCGAA
ACGCTCGCGC TGGAAGTCGG CCCCCTCGGT ATCCAGGTCA CGGCGGTCGA ACCCGGTGCG
ATGCGCACGC GCTTTGCCGA AGCCGGCTCG CTGCAGGTCT CGCCGTTCGG CCCGGCCTAT
GAGGCGACCG TCGGGACGAC GATCGGGATG ATGCAATCGC CCGAGTACAA CAACATCTTG
CGCGATCCCG ACGGCGTGGC AGCGATGATC CTTCAAGTGG CTGCACTGGA CGATCCACCC
TCCCGAATTC TTGCCGGCGC AGACTCGTTC GAAATGGGCA TTGGTTCAGG CGACGCGAGG
CGCGCTTCTG ATCTGCATTG GGAAAAGCTG AGCCGCTCGG CCACCGTGGA AGAAAGGCTC
CTGTCGGCCT GA
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| Protein sequence | MTETYFVTGS SVGLGRSIVE AALAQGHNVV ATARNPAVLE DLAARYSGQL LAVRLDVTDA
EGARDAVRQA VDKFGRLDVL INNAGFSGVG SIEDMPLELI EAQLSTNFLG AVNLTRAVLP
TMRARARGRI LLVSSIGARI ATAGAGVYYA SKAAVSALAE TLALEVGPLG IQVTAVEPGA
MRTRFAEAGS LQVSPFGPAY EATVGTTIGM MQSPEYNNIL RDPDGVAAMI LQVAALDDPP
SRILAGADSF EMGIGSGDAR RASDLHWEKL SRSATVEERL LSA
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