Gene Sala_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0058 
Symbol 
ID4081552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp63977 
End bp64852 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content54% 
IMG OID638008419 
Producthypothetical protein 
Protein accessionYP_615117 
Protein GI103485556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.20737 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGC CTGCTCCAAC GCGATTTCTG CTGTACATCG ACATTCTCGG TTTTTCCGAA 
ATGACGAAGA GCGATCCTCG TTCGGTCGCT CGCACCTATG CGATCTTGAA CAAGCTTAAT
GTACATCGGG ACAAGGCATT CAAGACGATC GTGTTTTCGG ACACGGTGCT GGTCTACAAC
CCCATCGGGG CGCGCAACGA CGAAGACCGC AATTTCTATG TCTGGTATTT GGCAGAGGCG
GCTGAAGACC TTTACAGCCG TTTGGTGGGG CAGGACATAT GGTTCCGGGC TGTCCTGATC
GCCGGAGAGT TCAATCACTA TCAGCTTGAG AATCTGGACG CCTTCTATGG AAAGGCCCTT
ATCGACGCTT ACCAATCGGA GAAGCGGCTA CCCTTGATTG GCCTTGCGCT CCATTCCTCG
TGCCTGCCCT ACAATCGGTT TTTTAGGGTT TCGCCCTTCA CCGACGACTT CTCGTTCGTC
TATTTGAGTC GTCCCTTAGA ATATCTGCAC GCGGCATCCG GTGACGGCTA TCCCTTCGCC
AATCGGATAG TCAGTGATCA TTCCCCAGCT CTCCCGGAAG GCGTGCGTTA CCTCTCCGAT
ATCTACCGCC TAATGCGGAC GCATCCAGAA CCGTTAGTTC GGGCGAAAGC GCTCACGACA
TGGGATTTCC ATGCTCGCCG ATATCCGGGA ATGGTTGCGG CTCTCGTCGC CAACAACTTT
AGTTTGGATG CTTTGGCCCC ACCGGGAACA TGGGATATTG CGGTGAAAAC CCTCGAAGAG
AATATCCGGC ACAACAAGCG GGCCGGTGCA GGTTCGCAGA TGTCTGTGAG TATCACTCCG
CAGCGGCCTA GGAAGCCAGG CAAGGCGATT TTCTAA
 
Protein sequence
MTEPAPTRFL LYIDILGFSE MTKSDPRSVA RTYAILNKLN VHRDKAFKTI VFSDTVLVYN 
PIGARNDEDR NFYVWYLAEA AEDLYSRLVG QDIWFRAVLI AGEFNHYQLE NLDAFYGKAL
IDAYQSEKRL PLIGLALHSS CLPYNRFFRV SPFTDDFSFV YLSRPLEYLH AASGDGYPFA
NRIVSDHSPA LPEGVRYLSD IYRLMRTHPE PLVRAKALTT WDFHARRYPG MVAALVANNF
SLDALAPPGT WDIAVKTLEE NIRHNKRAGA GSQMSVSITP QRPRKPGKAI F