| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0057 |
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| Symbol | |
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| ID | 4081551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 62767 |
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| End bp | 63480 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638008418 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_615116 |
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| Protein GI | 103485555 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.357881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAGAGG ATACCGTCGA TCCAGAGGCA CCGCGTCATC CCGGCTTCGT GCGCAAAGCG
CTGGACTGGG CGGAGGATCT GTCCGCGCAA GAGATTTTGA CGGCGGCGAG GATCAAGGAC
CGGACGGCTA GCGGTTATCT CCCGTCAGCG GCGCTGGTTC GACTCGTTCG CCGGTATCGA
ACTGAGGGAG ACGATGACAG CAGCACCCGC CTCAGCACGC TCCTAATTGC GCGCGCCTAC
GAATATGTAC GCGGCATCTA CGCCCGGATG GGCGTTGACG GCCAAGATGT GGTCCAAGAG
ACCATGCAGA CATTCCTAAC TGAGCTCGCC GAACAGGACG GGGTCGACTG GTGGGAGGCG
ACCTTCGAGC GTGAATTGCG GCGTCGGGCG GCCGATGCGT ATCGGCATCT GTTCAAGCGC
CACCGATCGC GCAGCTTGGT ATTGCCCGAA GATCACGATC GGGGCGACGA CGGCGAAGAA
GCCCATGAGA TCGCACGCCG AGCCGCCCTT GCGGCCTTCG CCGAGGTGCG CATTCCCACC
GAGAAAAAGC GCCGATTATT CCTTTTGCTA ATGTTGAATG AATTGCCGAT CGATGCGCCC
GAGGCGCCGA ATGACCTCGT CCGGCTGACC GGAATCCCGC GCAGCACATT GGCCAATCTC
AAGACTGAAT TCGGGCGCAT GCTCAAATCG GCGCTCGCGG AGAAGACGTC ATGA
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| Protein sequence | MKEDTVDPEA PRHPGFVRKA LDWAEDLSAQ EILTAARIKD RTASGYLPSA ALVRLVRRYR
TEGDDDSSTR LSTLLIARAY EYVRGIYARM GVDGQDVVQE TMQTFLTELA EQDGVDWWEA
TFERELRRRA ADAYRHLFKR HRSRSLVLPE DHDRGDDGEE AHEIARRAAL AAFAEVRIPT
EKKRRLFLLL MLNELPIDAP EAPNDLVRLT GIPRSTLANL KTEFGRMLKS ALAEKTS
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