Gene Sala_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0056 
Symbol 
ID4081550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp62186 
End bp62770 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content61% 
IMG OID638008417 
Producthypothetical protein 
Protein accessionYP_615115 
Protein GI103485554 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.434807 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATA TCAATCCAAA CCTCGGCAGA CTGGCCGAAG ACTATATCGT CAGCGGCGCC 
TGGGACCCCG AACTAGTGGA CAAGCTCGGT CCGGACGAAC TCGATCAATT GTTCAGCCAT
TTGACGGCCC GTGCCGCGGT TGAGACGGCG GCCGCCACAC TTGAGCCCGA GTCCCTCGAA
CTCGATGAGG ACGCACAAGC GGCAGTATTG AGGCTCCAGA GTTTCTATCT GGGCGAAGTT
GCACGCGTCC GAACCGCCAA GCCCGACGCG GCGGCGATGC TCCTGAAGCC GGCAACCTGG
TTGGCGATCG AGCCAGTCTT GCGCGACCGC GATTTCCTCA TCCGGTTGGC GCAGCGCCGC
TTGCGTGGGA TGCAGTCGCG TTGCACGCAG GATATTGCGG ATCTGCTCGG TTATTCGCGT
AGAGCGGTGG CGGACTTTTT CAGAGGCGAG GCGGGCGAGG GCCTGACACT TGCGGAGAAC
CGTAACACCG GAAAGCCCGA TGATGGTGGA GACGAGGAGT TTTCCACCGC GCTGGCGCGC
TCAGATATTC CCGAGGCGTT CAAGCGGAGA TGGAGGGAAG AGTAA
 
Protein sequence
MKNINPNLGR LAEDYIVSGA WDPELVDKLG PDELDQLFSH LTARAAVETA AATLEPESLE 
LDEDAQAAVL RLQSFYLGEV ARVRTAKPDA AAMLLKPATW LAIEPVLRDR DFLIRLAQRR
LRGMQSRCTQ DIADLLGYSR RAVADFFRGE AGEGLTLAEN RNTGKPDDGG DEEFSTALAR
SDIPEAFKRR WREE