Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0056 |
Symbol | |
ID | 4081550 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 62186 |
End bp | 62770 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 638008417 |
Product | hypothetical protein |
Protein accession | YP_615115 |
Protein GI | 103485554 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.434807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAATA TCAATCCAAA CCTCGGCAGA CTGGCCGAAG ACTATATCGT CAGCGGCGCC TGGGACCCCG AACTAGTGGA CAAGCTCGGT CCGGACGAAC TCGATCAATT GTTCAGCCAT TTGACGGCCC GTGCCGCGGT TGAGACGGCG GCCGCCACAC TTGAGCCCGA GTCCCTCGAA CTCGATGAGG ACGCACAAGC GGCAGTATTG AGGCTCCAGA GTTTCTATCT GGGCGAAGTT GCACGCGTCC GAACCGCCAA GCCCGACGCG GCGGCGATGC TCCTGAAGCC GGCAACCTGG TTGGCGATCG AGCCAGTCTT GCGCGACCGC GATTTCCTCA TCCGGTTGGC GCAGCGCCGC TTGCGTGGGA TGCAGTCGCG TTGCACGCAG GATATTGCGG ATCTGCTCGG TTATTCGCGT AGAGCGGTGG CGGACTTTTT CAGAGGCGAG GCGGGCGAGG GCCTGACACT TGCGGAGAAC CGTAACACCG GAAAGCCCGA TGATGGTGGA GACGAGGAGT TTTCCACCGC GCTGGCGCGC TCAGATATTC CCGAGGCGTT CAAGCGGAGA TGGAGGGAAG AGTAA
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Protein sequence | MKNINPNLGR LAEDYIVSGA WDPELVDKLG PDELDQLFSH LTARAAVETA AATLEPESLE LDEDAQAAVL RLQSFYLGEV ARVRTAKPDA AAMLLKPATW LAIEPVLRDR DFLIRLAQRR LRGMQSRCTQ DIADLLGYSR RAVADFFRGE AGEGLTLAEN RNTGKPDDGG DEEFSTALAR SDIPEAFKRR WREE
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