Gene Sala_0053 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_0053 
Symbol 
ID4081547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp57838 
End bp58296 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content63% 
IMG OID638008414 
Producthypothetical protein 
Protein accessionYP_615112 
Protein GI103485551 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCGG ACCGCGTCAT CTTCGAGCGC GACATTGCCG CGGCGCCCTT TCTGGAGGGC 
GCCGCACGCA ATCGATGGGC GCTGCGAACC CTCGAATGGC CTCACGGAAT GTTCGATGTC
ACCGCCCGTG ACGGCCGCCT GTTCCATCTG CGCCTCGATT TTACCGGCTA TCCCGCGGCG
TCCCCGACCG GAGGGCTCTG GGACCCGGAC ACCGGGGCAA TCCTGGCGCT GGACAAATGG
CCAATCGGCG ATGTCGCGTT TGCCAGCGTG TTCCGAAGGG ACTGGCAGGA TGGCCGGGCG
CTTTACATGC CCCTCGACCG GATTTCACTG ACCGGTCACC ACGACTGGCC GACGCAATAT
CCGCACCTAG TCTGGAGGCC GGATGTCGGT CTCATCCAGT ACCTCGCCGA AGTGCATCGG
TTACTCAACA TGCGAGGCTA TCATGGTATC GTCGGCTGA
 
Protein sequence
MTPDRVIFER DIAAAPFLEG AARNRWALRT LEWPHGMFDV TARDGRLFHL RLDFTGYPAA 
SPTGGLWDPD TGAILALDKW PIGDVAFASV FRRDWQDGRA LYMPLDRISL TGHHDWPTQY
PHLVWRPDVG LIQYLAEVHR LLNMRGYHGI VG