Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0050 |
Symbol | |
ID | 4081544 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 54644 |
End bp | 55894 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638008411 |
Product | metallophosphoesterase |
Protein accession | YP_615109 |
Protein GI | 103485548 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAGGAA CCTTTACTTT CGTTCACGCG GCCGATGTTC ATCTCGACAG CCCGCTTGGC GGATTGGCGA AGCGGGACAA AGCCTTTAGC GGTCTGGCCC TCAACGCGAC CCGGCGCGCC CTTGCGAATG TCGTCGATCT GGCCATCGCG GAGGGGGCCG CATTTGTCGT CGTCGCAGGC GACCTCTACG ACGGCACCTG GAAGGATCAG TCGACCGGGC AGTTTGCGGT TTCCCAGTTT GCGCGGCTGT CGCGAGCGGG CATTCGCGTC GCCATCGCCT TCGGAAATCA TGATGCCGAA AGCCGGATTA CCCGCCATTT GACCATGCCG GAAGGCGTTT TCGGATTCTC CAATCGGAAG TGCGAGACCG TCCTGTTCGA GGATCTCGGA GTCGCGCTGC ACGGCCGAAG CTACAAGGAT GTAGCGACCC TCGAGAATAT CGCAGCTGAA TATTGTCCGC CGGTCACCGG GATGTTCAAC TTGGCGGTGC TTCACACCGC GCTTGAAGGG CATCCGGATC ATGCGCGCTA CGCGCCCTGC TCCGTCGGCG AGCTCGTGGC GTCGGGACAT GACTATTGGG CGCTTGGCCA TGTCCATGAT GCATCAATCC GCTCCGAGCA TCCGCACATC GTTTATCCAG GCAATACCCA GGGCCGGAAT GTCAGGGAGA CCGGCGTCAA GGGTGCCATG GTGGTTCGAG TGGAGGAAGG CGTCGTGCGG TCGGTCGAAC ACCGCGCGTG TGACGAAGTG CGATGGGCTC GGCCGGAGTT CGACGGGCGA CAGGCGAGCG ACATGCACGA GCTTCTCTCC GGCATCGGCG GTGTGCTCCA AGAAGCCATC GCAGGCGCGG GCGACCGACC GACGGCGGTA CGCCTTCACG TGAAGACCTC TGGCGGCCTC CAAAACAAAC TGCTCGCCGA TCCGGATTGG TTTAACGCGG AAGTCGGCGC GCGCGCCATG ACCGTGTCGG AGAGTTTGTG GATCGAAAGG GTTAAGGTTG AAAGCAGTGA AGACGCCGCT ACTCGGGGGC TTCCGCCTGA GTTGATCGAA CTGCTGAATG GCGCATTGGC CGATCCGGAT TGTCTGCGCG CGGTGGAGGA TGCGGTCGCG CCGCTTGTCG GCAAGATGCC TGCTGGCACG ATTGATGCGG ATCTTGCACC GCTATTGGCC GCAGCAAGCG CGCGGGATGG TAACTCCCTG CTCGCGGCGG CAAAGCGAGC CGTCGAAGCT TCGCTAAGCG TAGATGCCTG A
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Protein sequence | MTGTFTFVHA ADVHLDSPLG GLAKRDKAFS GLALNATRRA LANVVDLAIA EGAAFVVVAG DLYDGTWKDQ STGQFAVSQF ARLSRAGIRV AIAFGNHDAE SRITRHLTMP EGVFGFSNRK CETVLFEDLG VALHGRSYKD VATLENIAAE YCPPVTGMFN LAVLHTALEG HPDHARYAPC SVGELVASGH DYWALGHVHD ASIRSEHPHI VYPGNTQGRN VRETGVKGAM VVRVEEGVVR SVEHRACDEV RWARPEFDGR QASDMHELLS GIGGVLQEAI AGAGDRPTAV RLHVKTSGGL QNKLLADPDW FNAEVGARAM TVSESLWIER VKVESSEDAA TRGLPPELIE LLNGALADPD CLRAVEDAVA PLVGKMPAGT IDADLAPLLA AASARDGNSL LAAAKRAVEA SLSVDA
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