| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0048 |
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| Symbol | |
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| ID | 4081542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 48884 |
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| End bp | 50962 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638008409 |
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| Product | phage integrase |
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| Protein accession | YP_615107 |
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| Protein GI | 103485546 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.404651 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCAA TCGAAAATGT GAACCGTCGC GGGGCCACCT ACTGGTGGCG TCGCCGGGTG
CGCTTCGTTG GACGGCTTGA ACGTCCTATA ACCATCGTAA CAACGGTCAG CCTTTTGACG
AAGGACCAGT CGGTCGCGCG ACGGCGCGCG GTCGCGATGA CCAGCCGAAG CGAGGTTGTG
CGAATGAGCT TATACGAACG GATCGAGCAG GAAGGACTGA CCAGCGAGCA GGTGAACCAT
CTCTTTCGAG AGGAGATGGT GCGGTATCGC AACATGCTGG CGCATCAGTT GGCGGTGATC
GAGAAGGACG GTGAGGGCAA TGTCACCGCT CGCTTCCACC AGATGCTCTC GATCTATGCA
GCGTTTAACG GCGATTTCAT CGCAAATGGC TTCGACGACT ATATGGGCAT CGATTACATC
GGGTCATTCG ACAAGCGCTT TCCGTCGCTG GACGAAGAGG CCCGCGCCAA TCTTTATGCG
ATGCTTTCCC AAGCCGGCGA TGTTCCCGGC AATTTGCTGA ATGAGGCAAA GGCATTGCTG
GAGCGGCTCG GCATCGAGCC AGCGGCTGAC CGAATCGAAA TTGCCCGGCA GGTCATGTGT
GGGGCACGGT TGACGGCCGC GGCAACCTAC GACAGCCCCG AGGTTCGGGC GATCGAACAC
AGCTTGGCGC TGATGAACGC GCTCGGGCGA GCGCCTCTGC AGACTTCGAT GCCTCCCCCG
ATCTCCGCCC CTGCGCCTCC AAACGCGTGG AACGCCAGCA CCATTGTGCC TGCGTCAGCG
TCGACACTCA CCGATGTGCA GACCCATTAT GCCACCCTTA GCCCGGTGCA GGCAGTAGAA
AAATATATGG AGCTGAAACC AAAGGCGCGC GGACGGGAAG ATGCGCCGGT CCTGGCCGAG
GGTGCGAACC CCAAAAAGCG CAAGTCGCAG CCGAAGGTCT GGGGCGCCAG CCAGAAGCGC
CAGTTCAAGG CCGCGCCCTT TCTGTTCGGC AAGTCAAATA ATGGCAAGGC CATGGCAGCA
ACATGCCAGG AAGACCTGAA CCAGTTTTAC GACCTGTTGA ACCGGTTACC GTCGTCGCAT
CATAAGTCGC CTCGACACGA AGCGATGTCG CTGGAGGAAA TTTGCAGCGA GGCGCTCGAT
CGTCTTACTG AAGAAGAGGA GCGCGGCGAA GAAATCTCGT TCGCGATTGG CCTCGACGTA
GGAACCATCA ATCGTCATTT CGCCAACCTC AAGAGATTGT GTGCGTGGCT TGCGACGAAA
ACGCCAATGG CGCCTCTCGA TTTTTCAGAT TTTATCCTCG ATGAGGACGA CAGGGACGAG
CGCGACGAGC GCGACCCCTA TACGATTGCG CAGGGTGAAG AATTGTTTCG TCTCGGCATC
TGGACCGGCG GTACGGGCGT CGATTTGCCT CAGCGTTTGT CCGTGACGCC GGGAGGCTCG
ATTTGGCACG ACGCAGCCTA TTGGGTCATG CCGCTGGTCT GGTATTCAGG TATGCGGCGC
GAGGAAGCTT GTAAGCTTTT GGTCGATGAT ATCGGCGAAG AAGACGGTAT CTTTTTTGTC
AACATCAGGA AAACTTCTGC GGGCGGCGTC AAGAACGCGA CCAGCGTTCG TAAGATTCCT
GTTTGCGAAG AGCTGCGTCG CTTGGGCTTC ATGCATTATG TCCAAGCCAT GAAGGAAGCT
GGCGAGCAGT ACCTCTTTCC AGAAATCCAA CCCGGTCGCA CAGGGCGTGC GCTGGGAGAT
GTATTTTTCA AAAATATATG GCTTCACATT AAGCCACGTC TGAAACTCGT AAAGCCGGGA
CAGGCGGTTC ACAGCGGTCG GCATATGGTC AGCACTGAAT TGAAGATGTT GCAGACATTC
GAAGAATTTC GGTCGGATCT TCTCGGTCAG AAGCATGGCG GCGAAAATGC CAACCGATAC
GCGAGCGCCA CACGCCTCCA GATCCTGCTT GATGTCGTGA ACCAGATACC CAAAGTGACC
GCCCATCTGC AAGATACCGT AGAAATCCGG TTGCTACCCG TTTGCATGCG CGGCGCGCGG
CCAACTCGCG AGAGCGCCGG GCGGCGCAAG CGCGGTTGA
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| Protein sequence | MPAIENVNRR GATYWWRRRV RFVGRLERPI TIVTTVSLLT KDQSVARRRA VAMTSRSEVV
RMSLYERIEQ EGLTSEQVNH LFREEMVRYR NMLAHQLAVI EKDGEGNVTA RFHQMLSIYA
AFNGDFIANG FDDYMGIDYI GSFDKRFPSL DEEARANLYA MLSQAGDVPG NLLNEAKALL
ERLGIEPAAD RIEIARQVMC GARLTAAATY DSPEVRAIEH SLALMNALGR APLQTSMPPP
ISAPAPPNAW NASTIVPASA STLTDVQTHY ATLSPVQAVE KYMELKPKAR GREDAPVLAE
GANPKKRKSQ PKVWGASQKR QFKAAPFLFG KSNNGKAMAA TCQEDLNQFY DLLNRLPSSH
HKSPRHEAMS LEEICSEALD RLTEEEERGE EISFAIGLDV GTINRHFANL KRLCAWLATK
TPMAPLDFSD FILDEDDRDE RDERDPYTIA QGEELFRLGI WTGGTGVDLP QRLSVTPGGS
IWHDAAYWVM PLVWYSGMRR EEACKLLVDD IGEEDGIFFV NIRKTSAGGV KNATSVRKIP
VCEELRRLGF MHYVQAMKEA GEQYLFPEIQ PGRTGRALGD VFFKNIWLHI KPRLKLVKPG
QAVHSGRHMV STELKMLQTF EEFRSDLLGQ KHGGENANRY ASATRLQILL DVVNQIPKVT
AHLQDTVEIR LLPVCMRGAR PTRESAGRRK RG
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