Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_0041 |
Symbol | |
ID | 4082228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 40793 |
End bp | 41344 |
Gene Length | 552 bp |
Protein Length | 183 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638008401 |
Product | TspO and MBR like proteins |
Protein accession | YP_615100 |
Protein GI | 103485539 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.195212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.762036 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAA TCGCAACGCC GGGCCAGCTT CGCATGTCCT ACCTCCGCTG GGCGCTCGTC ACCGTTCCCG CCATCGTCCT CATCGGCAGC CTGATGGGCA TCCTTTCGAA CAGCGGTTAT GACAATCGCT GGTTCGCCGC GCTCGACCTG CCGGCGATCA CCCCGCCGGG CTGGGTGTTC GGCATCGTCT GGCCGATCCT GTACATCATG CTCGGCCTGT CGCTCGCGAT GATTCTCCAC GCGCGCGGTG CAAAGGGGCG CGGCTTTGCG CTGCTGCTCT TCTTCGTCCA GCTGATCGCC AATTTCGCAT GGTCGCCGCT CTTTTTCGGC CAGCATCAGG TGACGAACGC GCTCTATCTC ATCATCTTCA TCCTGATGGT GTCGATTGCC ACCGCCTTTG CCTTTGCGCC GATCCGCAAG GCCGCGGCGT GGCTGCTGGT GCCGTATATG GCGTGGCTGA GCTTTGCCGC GATCCTCAAT TTCCAGATCG ACCAGCGCAA TCCCGGCGCC GAAACCCTTG TCCCCGCCGC CGCGACCACC CAGATAGGCT AA
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Protein sequence | MTEIATPGQL RMSYLRWALV TVPAIVLIGS LMGILSNSGY DNRWFAALDL PAITPPGWVF GIVWPILYIM LGLSLAMILH ARGAKGRGFA LLLFFVQLIA NFAWSPLFFG QHQVTNALYL IIFILMVSIA TAFAFAPIRK AAAWLLVPYM AWLSFAAILN FQIDQRNPGA ETLVPAAATT QIG
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