| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0037 |
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| Symbol | |
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| ID | 4082224 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 36101 |
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| End bp | 38722 |
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| Gene Length | 2622 bp |
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| Protein Length | 873 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638008397 |
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| Product | 5-methyltetrahydrofolate--homocysteine methyltransferase |
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| Protein accession | YP_615096 |
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| Protein GI | 103485535 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1410] Methionine synthase I, cobalamin-binding domain |
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| TIGRFAM ID | [TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR02082] 5-methyltetrahydrofolate--homocysteine methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0357424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.645269 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA CCCTTTCCTC CTCCACCTTC GTCAACATCG GTGAACGCAC CAACGTCACC
GGTTCAGCGG CGTTCAAGAG GCTGATCCTC GCCGACGACT ATGCCGCGGC GGTCGAGGTC
GCGCGCCAGC AGGTCGAAAA TGGCGCGCAG ATCATCGACG TCAATATGGA CGAAGGCCTA
CTCGACGCCG AACATGCGAT GACGACCTTC CTCAAGCTCA TCGCCGCCGA GCCCGACATT
GCGCGCGTGC CGGTGATGAT CGACAGTTCG AAATGGAGCG TGATCGAGGC CGGGCTGAAG
TGCGTTCCCG GCAAGCCGAT CGTCAATTCG ATCAGCATGA AGGAAGGCGA GGAGCAATTC
CTGGACCATG CGAAGAAGTG CATGGCCTAT GGCGCCGCGG TCGTCGTCAT GGCGTTCGAC
GAGGTCGGAC AGGCCGACAC CAGGGAGCGC AAGGTCGAGA TTTGCGAGCG TGCCTACAAG
CTGCTGATGA CCATCGGCTT TCCGCCCGAG GACATTATCT TTGATCCCAA TATCTTCGCG
GTCGCGACGG GGATCGAGGA GCATGACAAT TATGCGGTCG ATTTCATCGA GGCGGTGAAG
GAGATCCGCG TCCGCTGTCC GCACGCGCAT TTTTCGGGGG GGCTGTCGAA CCTGTCGTTC
AGCTTTCGCG GCAACGAGAC CGTGCGCCGC GCGATGCACA GCGTCTTTCT CTACCATGCA
ATTCCCGCGG GACTCGACAT GGCGATCGTC AACGCCGGGC AGCTCGACGT CTATGACACG
ATCGACCCCG AACTCAGGAC CGCGTGCGAG GATGTCATCC TCAACCGCAA GGTCGAAGGC
GAAGAGCTCA GCCCTACCGA ACGGCTGATT GCGCTCGCCG AACGCTATAA GGGAACGAAC
GCCGCGCAGG AAAAGGCGGC TGAGGAATGG CGCGGCTGGG CGGTCGAAAA GCGCCTTGAA
CATGCGCTGG TCAAGGGCAT CGACGCGCAT ATCGTCGAAG ATACCGAAGA AATGCGCCGC
GCCATGGATC GTCCGATCGA GGTGATCGAA GGGCCGCTGA TGGACGGGAT GAACGTCGTC
GGCGACCTGT TCGGGTCGGG CAAAATGTTC CTGCCGCAGG TCGTCAAATC GGCGCGCGTG
ATGAAAAAGG CGGTCGCGCA CCTGCTGCCT TTCATCGAGG CGTCGAAGGA GCCGGGAGCA
AAGGGCAAGG GCAAGATCGT GATGGCGACC GTCAAGGGCG ACGTCCACGA CATCGGCAAG
AATATCGTCG GCGTCGTGCT GCAGTGCAAC GGTTTCGAAA TCATCGACCT GGGCGTGATG
GTGCCGTGGA GCAAGATCCT GGAGGCCGCG AACGAGAATG ACGCCGACAT GATCGGTCTG
TCGGGCCTCA TCACCCCCTC ACTCGACGAG ATGGTGACGG TGGCCGAGGA AATGCAGCGC
GCGGGCATGA CGATTCCGCT CCTCATCGGC GGCGCGACGA CGTCGAAGGT CCATACCGCG
CTGCGCATCG ACCCGGCCTA TCAGGGGCCG GTGCTCCACG TTCTCGACGC CAGCCGCGCG
GTCGGCGTCG CGACCGCGCT GGTCAGCGAC ACCGGGCGCG ATGCCTATGT GAAGGGGTAT
AAGAATGATT ACGCCCATGT CCGCGACGTG CGCGCGGGCA AGGGGCAAAG CGTGCTGCTG
AGCATCGAGG AGGCGCGCGC CAATTATTAC GATGCCTATT TGAGCGACAA GCCCGCACCG
CCGCTCCAGC CCGGCCTCCA CCGCTTCGAC GACTGGTCGC TCGCGGACCT GCGCGACTAT
ATCGACTGGA CGCCCTTCTT TCGCGCATGG GAACTGCATG GAACCTGGCC GTCGATCCTG
CAAGACGAGG TGGTCGGGGA GACGGCGCGG GCGCTCAAGG CCGATGCCGA TGCGATGCTC
GACCAGATTA TTGCGGAGCA ATGGCTGACG GCGCGTGGGG TTTGCGCCTT CTGGCCGTGT
GCGCGGCACG GTGACGATAT TGTCATCCAC CTTGCCGAGG AAGAGCGCCA TGTGACGCTC
CCGTTCCTGC GCCAGCAAAT CAAGAAGAGC CGCGACCGCG CCAATATGTG TCTCGCCGAC
TTCATCGACC CGGCGGGTGA CTGGATCGGC GGCTTTGCGG TCGGCATCCA TGGGATCGAG
CCGCATTCGG AGCGCTTCCG CGCCGACAAG GATGATTATT CGGACATTTT GCTCAAAGCG
CTCGCCGACC GCTTCGCCGA AGCCTTTGCC GAGCGGCTGC ACCAGCATGT CCGCACCACA
TTATGGGGCT ATGCGCCGGG CGAACAGCTC ACCAACGAAG CGCTGATCAA GGAGGAATAT
CGCGGCATCC GCCCGGCGCC CGGTTACCCG GCGTGCCCCG ACCACAGCCT GAAACCGATC
CTGTTCGATC TGCTTGGCGC GGGAGAGAAT GCCGGGCTGG TGCTGACCGA AAGTTTTGCG
ATGCTGCCGA CCGCGGCGGT GAGCGGCTTT TATTTCGGCC ATCCCGAAAG CCAGTATTTC
GGCGTAGCGC GGATCGGCAG TGACCAGCTG GAGGATTATG CCCGGCGACG CGGCGTCGAT
CTGGAAACCG CGACGCGCTG GCTGCGGCCC AATCTGGATT GA
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| Protein sequence | MTETLSSSTF VNIGERTNVT GSAAFKRLIL ADDYAAAVEV ARQQVENGAQ IIDVNMDEGL
LDAEHAMTTF LKLIAAEPDI ARVPVMIDSS KWSVIEAGLK CVPGKPIVNS ISMKEGEEQF
LDHAKKCMAY GAAVVVMAFD EVGQADTRER KVEICERAYK LLMTIGFPPE DIIFDPNIFA
VATGIEEHDN YAVDFIEAVK EIRVRCPHAH FSGGLSNLSF SFRGNETVRR AMHSVFLYHA
IPAGLDMAIV NAGQLDVYDT IDPELRTACE DVILNRKVEG EELSPTERLI ALAERYKGTN
AAQEKAAEEW RGWAVEKRLE HALVKGIDAH IVEDTEEMRR AMDRPIEVIE GPLMDGMNVV
GDLFGSGKMF LPQVVKSARV MKKAVAHLLP FIEASKEPGA KGKGKIVMAT VKGDVHDIGK
NIVGVVLQCN GFEIIDLGVM VPWSKILEAA NENDADMIGL SGLITPSLDE MVTVAEEMQR
AGMTIPLLIG GATTSKVHTA LRIDPAYQGP VLHVLDASRA VGVATALVSD TGRDAYVKGY
KNDYAHVRDV RAGKGQSVLL SIEEARANYY DAYLSDKPAP PLQPGLHRFD DWSLADLRDY
IDWTPFFRAW ELHGTWPSIL QDEVVGETAR ALKADADAML DQIIAEQWLT ARGVCAFWPC
ARHGDDIVIH LAEEERHVTL PFLRQQIKKS RDRANMCLAD FIDPAGDWIG GFAVGIHGIE
PHSERFRADK DDYSDILLKA LADRFAEAFA ERLHQHVRTT LWGYAPGEQL TNEALIKEEY
RGIRPAPGYP ACPDHSLKPI LFDLLGAGEN AGLVLTESFA MLPTAAVSGF YFGHPESQYF
GVARIGSDQL EDYARRRGVD LETATRWLRP NLD
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