| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0036 |
|---|
| Symbol | |
|---|
| ID | 4082223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 34911 |
|---|
| End bp | 35978 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638008396 |
|---|
| Product | 5-methyltetrahydrofolate--homocysteine S-methyltransferase |
|---|
| Protein accession | YP_615095 |
|---|
| Protein GI | 103485534 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0646] Methionine synthase I (cobalamin-dependent), methyltransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.20807 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCGT CATTGGCCAG CAGCGCGCGC GACGCGCTGA AAGAGGCGGC GAAGCAGCGC
ATCCTCATCA AGGATGGGCC CTTCGGTACC GCCTTTCAGC ATCGCAACGC CTATGTCGGC
GTCGACGGGG CCGAACACGG CCTGTCGATC GATCCGCGCG GCAACGGCGA TTATCTCAAC
CTGGCGCGGC CCGATATCGT TGCGGACATC ATGCGCGACT ATCTTGTCGC GGGCGCCGAT
ATTATCGCAA CCAACACCTT CAGCGCGAAT CGCATCAGCC AGGCCGATTA TGGCGCCGAG
CATCTGGTGG CCGGGATCAA TCTGGCCAGT GCGCGCCTCG CCCGCCGCGA GGCCGATGCG
ATGCAGCAAA AGGACGGCCG TCGCCGCTTC GTCGCTGGCG CGGTCGGGCC GACGAACAAG
ACGCTGTCGC TGTCGCCCGA CGTCAACAAT CCGGGTTTTC GCGAGATCGA CTTCGACGAA
TTGAAGGACG TCTATCTGGA ACAGGTGGTC GCGCTGGCCG AAGGCGGCGC CGATTTCATC
CTGATCGAGA CCATCTTCGA CACGCTGAAT GCGAAAGCCG GGATCGCCGC GACGCTGGAA
GCCGAAGCGG CGTTGGGGCG CGAACTGCCG CTGATGATCT CGATGACCCT GACCGACCTG
TCGGGCCGCA ATCTGTCGGG GCACACGGTC GAGGCCTTCT GGTATGCGGT GCGTCATGCA
AAACCGATGA CGATCGGGCT CAATTGCTCG TTCGGCGCGG CGCAGCTGCG CCCGCATGTT
AAGGTTCTGT CGGACATCGC CGATGCGCTG GTGATGGTCT ATCCCAATGC GGGCTTGCCG
AACGAGCTTG GCGAATATGA CGAGCTGCCC GAGACGACAG CCGAACTCGT CCGCGAATGG
GCCGAGCATG GGCAGGTCAA TATCCTCGGC GGCTGCTGCG GTTCGACGCC CGACCATATC
GCGGCGATGG CGAAGGCGGT CGAGGGGCTG GCGCCGCGCC AGGTGCCCGA GGTGCCGGTG
CGGACGCGGC TGGCGGGGCT GGAGCCATTC ACGATGGCGG CCGCCTAG
|
|---|
| Protein sequence | MTSSLASSAR DALKEAAKQR ILIKDGPFGT AFQHRNAYVG VDGAEHGLSI DPRGNGDYLN
LARPDIVADI MRDYLVAGAD IIATNTFSAN RISQADYGAE HLVAGINLAS ARLARREADA
MQQKDGRRRF VAGAVGPTNK TLSLSPDVNN PGFREIDFDE LKDVYLEQVV ALAEGGADFI
LIETIFDTLN AKAGIAATLE AEAALGRELP LMISMTLTDL SGRNLSGHTV EAFWYAVRHA
KPMTIGLNCS FGAAQLRPHV KVLSDIADAL VMVYPNAGLP NELGEYDELP ETTAELVREW
AEHGQVNILG GCCGSTPDHI AAMAKAVEGL APRQVPEVPV RTRLAGLEPF TMAAA
|
|---|
| |