| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0029 |
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| Symbol | |
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| ID | 4082216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 25868 |
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| End bp | 28018 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008389 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_615088 |
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| Protein GI | 103485527 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.241491 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0713753 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCA AATGGCTCGC CGCCGCCCTG CTTTCGGGCG CGCTTCCCTT CCCCGCACTG
GCGCAGGACG CGCCGCCTGT CGACGAAGCG CTGGCGGGGG ACGCGGGCGA AACGATCATC
GTGACCGCCG CGCGCACCAT CCTGCCGCCA AACGCGCTGC CGCTGACGAT CGACATCATC
GAAAAGGATG CGCTCGACCA GCAGATCGCG ATTGCCGGTT CGGTCACCGA CGCGGTTGCG
ACCCTCAGCC CCAGCTTCTC GCCGACGCGG CAGAAGCTGT CGGGCGCGGG CGAAACGCTG
CGCGGGCGCT CGCCGCTCTA TGCGATCAAC GGCATCCCGC AATCGACCCC GCTGCGCGAC
GGCAGCCGCG ACGGCTTCAC CATCGACGGC TTTTTCGTCG ATCGGGTGGA ACTGATCTTC
GGATCGAACG CCTTGCAGGG GATCGGCGGC ACCGGCGGCA TCGTCAACCA GGTGACGGTC
GGCGCGCCGA CCGACGAAGG CGTTTCGGGC CGCGCGCTGC TTCAGGCGAG CGCCGACAAT
GATTTTTCCG ACGAAGGCAT GGGCGGCAAG GTCGCGGGCC TCGTCCAGTA CAAGGCGGGG
CGCTTCGACG CCTCGGTCGG CGCCGCCTGG GAACGCCGCG GCGTCTTTTT CGACGGCGAG
GGCCGCCGCG TCGGCATCAA CCTGACGCAG GGCGAGACGC AGGATTCGGA GACGCTCTCG
CTGTTCGGCC GCTTTGGTTA CGCCGTGACC GACACGATGC GGCTCGACCT GATCGCCAGC
CGCTTCGAGC TGGAAGGCGA CGGCGACTAT GCCGCGGTCG CGGGCAACAA GGCCGCGGGC
CTGCCGACGA GCGCACGGCC GGGGACGCCG CCGGGCGTCC CCGCCACGAA CCGCACCGAA
AGCGTCTCGC TGTCGCTGAC CGACAGCAAT TTGGGCGGCG GCAATTTCAT CAGCCAGATT
TTCTGGAACC GCAGCCGCGA CACCTTCGGC GGCGAACCCA ATCCGATCGC GACCTTTCAG
GACGCGGCGA TCGCCCCCAT CGGCACCCTG TTCGACCAGT CACAGAACCG CAGCCGCAAA
TATGGCGGCA AGCTGAGCTA TGAGCGCGCC GTGCCGGGGC TCGAGGCGCT GACGCTGATC
GCGGGCTTCG ACGCGCTGTG GGATTCGACC GAGCAGCGGC TGATCGCGAC CGACCGCGTC
TGGGTTCCGC CGACCGATTT TCGCAGCCTT GCGCCCTTCG GCCAGGCGAA CCTCCAGCTT
GCGGGCGGGC TCGTCCGCCT CGCGGGCGGC GTGCGCTACG AAAATGTGAA GATCAGCATC
GACGATTACA CGACGCTGGC CTCCGCGGGC CGCACCTTCG TTTCGGGCGG CAGCCCGACC
TTCGACGACG TGCTGCTGAA CGGCGGCGTC ATCGTCGAGC CCATGCCCGG CATCCGCGCC
TATGCGAGCT ATGCCGAGGG ATATACGGTG CCCGACGTCG GCCGCATCAC GCGCGCGGTG
CGCACCCCCG GCGTCGACAT CGACAGCTTC CTCGACATCT CGCCCATCGT CTCGAACAAC
CGCGAGCTGG GCGTCGAGGT GAAGCGCGGC CCGCTCGACG CCAGCGCGAC CTATTTCTGG
TCGTCGAGCA AGAAGGGGCA ATTGCTCATC GCGCGTCCCG ACGGCATTTT CGACGTCCAG
CGCCAGCGCG TCGAAATCGA GGGGCTGGAA ATCAACCTGG CGGTCAAGAT GCCGATCGAC
GGGCTGACGC TGTCGGCGGG CTATGCGCAT ATCGTCGGCC AGTTCGACGA TGACGCGGAC
GGGCTGGTCG AAACCGACCT CGACGGCGCG AACATCTCGC CCGACCGGCT GAACCTCGCT
GCGGCCTATG CGAACGGTCC CTTGTCGGCG CGGGTGCAGA CGCAATTCTA TCTGGCGCGG
ACCTTCCGCG GCCCGAACCG CGACGCGCGC AACGATTTCG AGGGCTACAA TCTGACCGAT
GCGATCGTCC GCTATCAGAC CAGCCTCGGC GGGGTGAGCC TCGCGGTGTC GAACCTGTTC
GACCGGCAAT ATATCAGCTA CGCGAGCGAC ACCCAGCGGC CGACCGACAA TTTCTTCAAT
TTTGCCGGGC GCGGCCGCAC CTTCACGCTC GGCTGGGATT ATCGCTTTTA A
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| Protein sequence | MNRKWLAAAL LSGALPFPAL AQDAPPVDEA LAGDAGETII VTAARTILPP NALPLTIDII
EKDALDQQIA IAGSVTDAVA TLSPSFSPTR QKLSGAGETL RGRSPLYAIN GIPQSTPLRD
GSRDGFTIDG FFVDRVELIF GSNALQGIGG TGGIVNQVTV GAPTDEGVSG RALLQASADN
DFSDEGMGGK VAGLVQYKAG RFDASVGAAW ERRGVFFDGE GRRVGINLTQ GETQDSETLS
LFGRFGYAVT DTMRLDLIAS RFELEGDGDY AAVAGNKAAG LPTSARPGTP PGVPATNRTE
SVSLSLTDSN LGGGNFISQI FWNRSRDTFG GEPNPIATFQ DAAIAPIGTL FDQSQNRSRK
YGGKLSYERA VPGLEALTLI AGFDALWDST EQRLIATDRV WVPPTDFRSL APFGQANLQL
AGGLVRLAGG VRYENVKISI DDYTTLASAG RTFVSGGSPT FDDVLLNGGV IVEPMPGIRA
YASYAEGYTV PDVGRITRAV RTPGVDIDSF LDISPIVSNN RELGVEVKRG PLDASATYFW
SSSKKGQLLI ARPDGIFDVQ RQRVEIEGLE INLAVKMPID GLTLSAGYAH IVGQFDDDAD
GLVETDLDGA NISPDRLNLA AAYANGPLSA RVQTQFYLAR TFRGPNRDAR NDFEGYNLTD
AIVRYQTSLG GVSLAVSNLF DRQYISYASD TQRPTDNFFN FAGRGRTFTL GWDYRF
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