| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0028 |
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| Symbol | |
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| ID | 4082215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 24779 |
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| End bp | 25867 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638008388 |
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| Product | PepSY-associated TM helix |
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| Protein accession | YP_615087 |
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| Protein GI | 103485526 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3182] Uncharacterized iron-regulated membrane protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.522005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.11263 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAC TGCTCGACAC GCTGCACCGC TGGACGGGGG GGCTCATCGG CCTGGTGCTC
GCGCTGCTCG GCCTGTCGGG CACGATCCTG CTTTACGAGC ATCTGTGGAT CGGCGTGCCG
GGCGCGGGCG ATCCGCTGCG AGGCGATCTT GCCACCGTCG CCGCGGCCAC CGAAAAGCTG
ATGGCGGCAC AGGGGACGCA GGGCATCATC TATGCCGACG AACGCTTCGG GCTGCACCAA
CTGCGGCTCG CAGAAGGTGC GGGCGCCTAT GCCAGTCAGT CGGGCGAGAT TGTCACGCGC
TGGGCGAGCC AGTGGGAGCG GCCCGAACTC TGGCTCTTCG ATTTCCACCA CCATCTCTTC
GTCGGCGACA ATGGCGAATG GGTGATCGGC GTCGCAGGGC TTGCAGGGCT GTTTTTCGTG
ATCAGCGGCG TCATCCTGTG GTGGCGCACA CGGCGGACTT TCCAGCTTCG CCTGTGGCCC
AAAAGGATGA GCCGCCCGTC GGTCCTGATG CACCACCGCG ACCTCGGCAT CGTCGCCGCG
CCCTTGTTGC TGATTTCGAT CGTCACCGGC ACGATGATGA TCTTCCGCCC GTTCGCCCTG
GGGGTGGTCG CCCCCTTCGG ATCGCCCGCC GAAACCGCGA AGGCGCTCGA TCTGCCGAAA
TACATGGGTG GCCCGCTTGC CGAAAAGCCC GATTACACCG CGATGCTGAC CAAAGCGCAC
CGCCGCTTCC CCGACGCCGA GTTCCGCATC CTCAGCCTGC CGCGCAAGGA TGGCGACCCG
ATCAGCCTGC GCATGAAACA GCCCGCCGAA TGGCTCCCCA ATGGTCGCAC GACCCTGTGG
TTCGACGCCG CGACCGGCGA CGTGCTGGGC GCGCGCGATG CGCTCGCGAT GCCGCCGGGG
GCGCAGGCGT TCAACATGGC CTTCCCGCTC CATGCGTCGA GGGTCGGCGG CTGGGCATGG
CGCAGCTTGC TGACGGTTTC GGGACTTTCG CTGACGCTGC TTGGCAGCCT CGCGGTATGG
ACCTTCTGGT TCAGGCGGCC GAAAACGGCG AAGCGCGCAG CAAAGAAGAC AGCGCTGGCT
TCGGCCTAG
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| Protein sequence | MMKLLDTLHR WTGGLIGLVL ALLGLSGTIL LYEHLWIGVP GAGDPLRGDL ATVAAATEKL
MAAQGTQGII YADERFGLHQ LRLAEGAGAY ASQSGEIVTR WASQWERPEL WLFDFHHHLF
VGDNGEWVIG VAGLAGLFFV ISGVILWWRT RRTFQLRLWP KRMSRPSVLM HHRDLGIVAA
PLLLISIVTG TMMIFRPFAL GVVAPFGSPA ETAKALDLPK YMGGPLAEKP DYTAMLTKAH
RRFPDAEFRI LSLPRKDGDP ISLRMKQPAE WLPNGRTTLW FDAATGDVLG ARDALAMPPG
AQAFNMAFPL HASRVGGWAW RSLLTVSGLS LTLLGSLAVW TFWFRRPKTA KRAAKKTALA
SA
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