| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_0025 |
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| Symbol | |
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| ID | 4082212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 19249 |
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| End bp | 20457 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638008385 |
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| Product | peptidase M23B |
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| Protein accession | YP_615084 |
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| Protein GI | 103485523 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.025775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCGTCGA AACCAACGGG CCTGCGCGAT GTGCGCCAGC GCTTTAACGC GCTGTTTCAG
GACCATGAAA TCTTCGTTCG CACGCACGGC CACGTCCGTT TCTTGCGTGT CAGCGCCCTC
TGGCAGAAAC GCGTCGCGCT GATCGCCGGG CTGGTGCTGC TCGCCTGGGC GGGCGCAACG
CTTGCCGTGC TCGTCAACCA GCTGCTCACC GCCGACGAAC GCGCGGCGGT TGCGGCGCAG
AAAGCCGCCG CCGCCGCGTC CGAGGCGCGC ATCGCCAAAT ATCGCGACCG CGTCGCCGAA
ACCGCCGCCG ATCTCGAAGA GCGACAGGCG CTGCTTGAAA GCGTCGCCGA AAGTCATTTC
GGCATCGATC CGGCCGACAT GGCCACCGCC GCCCAAAAAA CGCATACGTC GGACGCCGCG
CCCGCCGAAC CCGTCAAGAC GAGCGCGATC GACCCGAACC TGCCGCCCGA AGCACAAGTG
CTGGCGCGGC TCGCAGCGCG GCAGGAGGCC TTTGCCGCAC GCCTGCTCGG CGCCGTCAAG
GACCGTGTCG CAAAAGCCGA AACCGCGGTT GCAGCTCTTG GCCTCAACCC CGACACGCTG
GTGCGCAACG CCGCGGCCGG TCGCGGCGGT CCCTTCATTC CCTTTCGTGG CCGCGGGGGT
CAGGCCAAGG CGCTCGGCGC CAGCTTCGCC GCGCTCGATG GTGCGCTGTT CCGCATGGAA
GTTCTCGAAC GCACGCTCGT CGCGGTGCCG TCGGGCAATC CCGCCAATGT TCTGATGATG
TCGTCGGGCT TCGGCTATCG CCGCGACCCC TTCACCGGCG CCGGCGCGAT GCACGCGGGC
GTAGACTTCC GCGGCCCGAT CGGCACGCCG ATCCTTGCCG CCGCGCCGGG CCGCGTCAGC
TTTGTCGGCG TCAAGTCGGG CTATGGCAAT GTCGTCGAAG TCGATCATGG TCAGGGCATC
ATGACGCGCT ATGCCCACTT GTCGGGGTTC ACGACCAGGG CGGGGGTCAA GGTCGCCGCG
GGGCAGCAGA TCGCCAAGAT GGGTTCGACC GGCCGGTCGA CCGGCAGCCA CCTGCATTTC
GAAGTCCGTT TGAACGGCGT CGCGGTCAAT CCGCGCCGCT TCCTGGAGGC CAAAGCCGAT
GTTCTCGAAG TCAAAAACGA CGCACGACAG CGAGTCGTCT CCGTCGCTGC CGCCCGCGGT
GACCGCTAA
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| Protein sequence | MSSKPTGLRD VRQRFNALFQ DHEIFVRTHG HVRFLRVSAL WQKRVALIAG LVLLAWAGAT
LAVLVNQLLT ADERAAVAAQ KAAAAASEAR IAKYRDRVAE TAADLEERQA LLESVAESHF
GIDPADMATA AQKTHTSDAA PAEPVKTSAI DPNLPPEAQV LARLAARQEA FAARLLGAVK
DRVAKAETAV AALGLNPDTL VRNAAAGRGG PFIPFRGRGG QAKALGASFA ALDGALFRME
VLERTLVAVP SGNPANVLMM SSGFGYRRDP FTGAGAMHAG VDFRGPIGTP ILAAAPGRVS
FVGVKSGYGN VVEVDHGQGI MTRYAHLSGF TTRAGVKVAA GQQIAKMGST GRSTGSHLHF
EVRLNGVAVN PRRFLEAKAD VLEVKNDARQ RVVSVAAARG DR
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